RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TAF15Q92804 592 aaKnown RBP eCLIP14.33□□□□□ -0.12
HDAC4-211ENST00000494800 ORAI1Q96D31 301 aa14.33□□□□□ -0.12
HDAC4-211ENST00000494800 DERL3Q96Q80 235 aa14.33□□□□□ -0.12
HDAC4-211ENST00000494800 FBN3Q75N90 2809 aa14.33□□□□□ -0.12
HDAC4-211ENST00000494800 TRAV8-7A0A075B6U6 113 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 IGHV2-26A0A0B4J1V2 119 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 FAM90A8PA6NJQ4 464 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 ZNF729A6NN14 1252 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-211ENST00000494800 H3BUI4 141 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 RGS10O43665 173 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 OR7C1O76099 320 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-211ENST00000494800 MAS1P04201 325 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 CDK2P24941 298 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 RBM11P57052 281 aaKnown RBP14.32□□□□□ -0.12
HDAC4-211ENST00000494800 SLC35A2P78381 396 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 RELBQ01201 579 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 SLC22A6Q4U2R8 563 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 MINOS1Q5TGZ0 78 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 HEPN1Q6WQI6 88 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 RTN4RL2Q86UN3 420 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 DTX3Q8N9I9 347 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 NDNFQ8TB73 568 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 MINOS1-NBL1R4GNA1 71 aa14.32□□□□□ -0.12
HDAC4-211ENST00000494800 MEIKINA0A087WXM9 373 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 MEGF11A6BM72 1044 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 GPR50Q13585 617 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 FAM189A2Q15884 450 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 SSX2Q16385 188 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 MPV17LQ2QL34 196 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 PRAMEF5Q5TYX0 476 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 AWAT2Q6E213 333 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 LHFPL4Q7Z7J7 247 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 ZNF596Q8TC21 504 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 UFD1Q92890 307 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 MUL1Q969V5 352 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 MRPS24Q96EL2 167 aaKnown RBP14.31□□□□□ -0.12
HDAC4-211ENST00000494800 COQ2Q96H96 371 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 AJUBAQ96IF1 538 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 NKX3-1Q99801 234 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-211ENST00000494800 CCDC90BQ9GZT6 254 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 NCOR1P1Q9H4R4 102 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 IFT22Q9H7X7 185 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 TCF7L1Q9HCS4 588 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 PITPNC1Q9UKF7 332 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 BLOC1S6Q9UL45 172 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 MRPS28Q9Y2Q9 187 aaKnown RBP14.31□□□□□ -0.12
HDAC4-211ENST00000494800 RNF114Q9Y508 228 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 TENM1Q9UKZ4 2725 aa14.31□□□□□ -0.12
HDAC4-211ENST00000494800 TRAV24A0A0B4J272 114 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 VGLL3A8MV65 326 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 TOR1AO14656 332 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 HTR1DP28221 377 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 GLP1RP43220 463 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 ARHGDIBP52566 201 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 LY6EQ16553 131 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 ACSM3Q53FZ2 586 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 GLIPR1L1Q6UWM5 242 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 ABHD12Q8N2K0 398 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 CREB3L1Q96BA8 519 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 TMED9Q9BVK6 235 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 DPCDQ9BVM2 203 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-211ENST00000494800 PPIL3Q9H2H8 161 aaKnown RBP14.3□□□□□ -0.12
HDAC4-211ENST00000494800 DUSP21Q9H596 190 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 SPACA1Q9HBV2 294 aa14.3□□□□□ -0.12
HDAC4-211ENST00000494800 KBTBD11-OT1A0A1B0GTJ5 212 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 MAGEA13PA6NCF6 341 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 GEMIN2O14893 280 aaKnown RBP14.29□□□□□ -0.12
HDAC4-211ENST00000494800 ATP6V1G2O95670 118 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 HSMCR30P0CW71 290 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 PRRX1P54821 245 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 PAX5Q02548 391 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 PLA1AQ53H76 456 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 ATAD3CQ5T2N8 411 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 Q6ZSV7 163 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 SUMF2Q8NBJ7 301 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 OR4C13Q8NGP0 309 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 LINC01006Q8NI28 216 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 NEK7Q8TDX7 302 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 WFDC12Q8WWY7 111 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 CNBD2Q96M20 576 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 OR5M11Q96RB7 305 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 UQCC2Q9BRT2 126 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 C16orf95Q9H693 158 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 GHRLQ9UBU3 117 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 KIF25Q9UIL4 384 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 RAB26Q9ULW5 256 aa14.29□□□□□ -0.12
HDAC4-211ENST00000494800 LSM2Q9Y333 95 aaKnown RBP14.29□□□□□ -0.12
HDAC4-211ENST00000494800 F2RL2O00254 374 aa14.28□□□□□ -0.12
HDAC4-211ENST00000494800 TSPAN9O75954 239 aa14.28□□□□□ -0.12
HDAC4-211ENST00000494800 CRHBPP24387 322 aa14.28□□□□□ -0.12
HDAC4-211ENST00000494800 PAX6P26367 422 aa14.28□□□□□ -0.12
HDAC4-211ENST00000494800 CEACAM3P40198 252 aa14.28□□□□□ -0.12
HDAC4-211ENST00000494800 RBM39Q14498 530 aaKnown RBP14.28□□□□□ -0.12
HDAC4-211ENST00000494800 IRF3Q14653 427 aa14.28□□□□□ -0.12
HDAC4-211ENST00000494800 TRAM1Q15629 374 aa14.28□□□□□ -0.12
HDAC4-211ENST00000494800 RBM48Q5RL73 367 aaKnown RBP14.28□□□□□ -0.12
HDAC4-211ENST00000494800 BRICD5Q6PL45 260 aa14.28□□□□□ -0.12
HDAC4-211ENST00000494800 PRSS48Q7RTY5 328 aa14.28□□□□□ -0.12
HDAC4-211ENST00000494800 PHYHIPQ92561 330 aa14.28□□□□□ -0.12
HDAC4-211ENST00000494800 NPFFR1Q9GZQ6 430 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms