RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 FAM90A18PA6NE21 464 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 FAM90A16PA6NEW6 464 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 FAM90A20PA6NIJ5 464 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 FAM90A9PA6NNJ1 464 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 FAM90A12PA8MX19 464 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 FAM90A5PA8MXJ8 464 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 SULT1B1O43704 296 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 FAM90A15PP0C7V4 464 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 FAM90A13PP0C7W8 464 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 FAM90A14PP0C7W9 464 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 FAM90A24PP0C7X0 464 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 NFYBP25208 207 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 KISS1Q15726 138 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 UTF1Q5T230 341 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 ZNF565Q8N9K5 539 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 OR51T1Q8NGJ9 327 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 TOMM40LQ969M1 308 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 LGALS12Q96DT0 336 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 FAM53CQ9NYF3 392 aa18.46■□□□□ 0.55
COL27A1-208ENST00000494780 PSMB11A5LHX3 300 aa18.45■□□□□ 0.54
COL27A1-208ENST00000494780 E9PQ18 207 aa18.45■□□□□ 0.54
COL27A1-208ENST00000494780 H0YJX3 145 aa18.45■□□□□ 0.54
COL27A1-208ENST00000494780 CIB2O75838 187 aa18.45■□□□□ 0.54
COL27A1-208ENST00000494780 GALEQ14376 348 aa18.45■□□□□ 0.54
COL27A1-208ENST00000494780 ELP2Q6IA86 826 aa18.45■□□□□ 0.54
COL27A1-208ENST00000494780 SYS1Q8N2H4 156 aa18.45■□□□□ 0.54
COL27A1-208ENST00000494780 PARP16Q8N5Y8 322 aa18.45■□□□□ 0.54
COL27A1-208ENST00000494780 ALG8Q9BVK2 526 aa18.45■□□□□ 0.54
COL27A1-208ENST00000494780 CALYQ9NYX4 217 aa18.45■□□□□ 0.54
COL27A1-208ENST00000494780 KIF25Q9UIL4 384 aa18.45■□□□□ 0.54
COL27A1-208ENST00000494780 MEIKINA0A087WXM9 373 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 J3QR06 171 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 DYNC1I1O14576 645 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 C21orf33P30042 268 aaPredicted RBP18.44■□□□□ 0.54
COL27A1-208ENST00000494780 GLP1RP43220 463 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 PAN3Q58A45 887 aaKnown RBP18.44■□□□□ 0.54
COL27A1-208ENST00000494780 VAX1Q5SQQ9 334 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 ZNF691Q5VV52 312 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 LINC00482Q8N8I6 264 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 PXT1Q8NFP0 134 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 OR13A1Q8NGR1 328 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 BARHL1Q9BZE3 327 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 GPR61Q9BZJ8 451 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 LINC00574Q9H8X3 128 aa18.44■□□□□ 0.54
COL27A1-208ENST00000494780 TMEM212A6NML5 194 aa18.43■□□□□ 0.54
COL27A1-208ENST00000494780 HSPB6O14558 160 aa18.43■□□□□ 0.54
COL27A1-208ENST00000494780 EI24O14681 340 aa18.43■□□□□ 0.54
COL27A1-208ENST00000494780 ZFPL1O95159 310 aa18.43■□□□□ 0.54
COL27A1-208ENST00000494780 SNRNP70P08621 437 aaKnown RBP18.43■□□□□ 0.54
COL27A1-208ENST00000494780 KRTAP10-11P60412 298 aa18.43■□□□□ 0.54
COL27A1-208ENST00000494780 EGFEM1PQ0D2K5 195 aa18.43■□□□□ 0.54
COL27A1-208ENST00000494780 MRPL28Q13084 256 aaKnown RBP18.43■□□□□ 0.54
COL27A1-208ENST00000494780 LHFPL3Q86UP9 236 aa18.43■□□□□ 0.54
COL27A1-208ENST00000494780 CNIH3Q8TBE1 160 aa18.43■□□□□ 0.54
COL27A1-208ENST00000494780 CPNE2Q96FN4 548 aaPredicted RBP18.43■□□□□ 0.54
COL27A1-208ENST00000494780 IDI2-AS1Q9NZ38 188 aa18.43■□□□□ 0.54
COL27A1-208ENST00000494780 TRAV24A0A0B4J272 114 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 IL1AP01583 271 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 PAX5Q02548 391 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 MADCAM1Q13477 382 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 IL13RA2Q14627 380 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 ZIK1Q3SY52 487 aaPredicted RBP18.42■□□□□ 0.54
COL27A1-208ENST00000494780 OR51D1Q8NGF3 324 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 OR56B4Q8NH76 319 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 OR5AK2Q8NH90 309 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 HAVCR2Q8TDQ0 301 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 CHPT1Q8WUD6 406 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 PYDC1Q8WXC3 89 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 NR1H4Q96RI1 486 aaPredicted RBP18.42■□□□□ 0.54
COL27A1-208ENST00000494780 ISG20L2Q9H9L3 353 aaKnown RBP18.42■□□□□ 0.54
COL27A1-208ENST00000494780 DHDHQ9UQ10 334 aa18.42■□□□□ 0.54
COL27A1-208ENST00000494780 A0A1W2PPI3 338 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 WI2-2373I1.2A0A1W2PRP0 233 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 NPIPB11E5RHQ5 1161 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 CCDC159P0C7I6 412 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 KCNJ3P48549 501 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 RAB7AP51149 207 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 ALDH3A2P51648 485 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 DEFB121Q5J5C9 76 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 SLC16A12Q6ZSM3 486 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 DRAM1Q8N682 238 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 OR10A7Q8NGE5 316 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 PSG11Q9UQ72 335 aa18.41■□□□□ 0.54
COL27A1-208ENST00000494780 FGF16O43320 207 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 FADS2O95864 444 aaKnown RBP18.4■□□□□ 0.54
COL27A1-208ENST00000494780 TMEM11P17152 192 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 GABRB1P18505 474 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 RAB3AP20336 220 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 RPL23AP62750 156 aaKnown RBP18.4■□□□□ 0.54
COL27A1-208ENST00000494780 HES1Q14469 280 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 ZSCAN26Q16670 478 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 RSBN1Q5VWQ0 802 aaPredicted RBP18.4■□□□□ 0.54
COL27A1-208ENST00000494780 ETV3LQ6ZN32 361 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 ZNF329Q86UD4 541 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 MRPL41Q8IXM3 137 aaKnown RBP18.4■□□□□ 0.54
COL27A1-208ENST00000494780 OR8H3Q8N146 312 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 C5orf56Q8N8D9 126 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 Q8NFD4 153 aa18.4■□□□□ 0.54
COL27A1-208ENST00000494780 TSEN15Q8WW01 171 aaKnown RBP18.4■□□□□ 0.54
COL27A1-208ENST00000494780 DPF1Q92782 380 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms