RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 KBTBD11-OT1A0A1B0GTJ5 212 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 FAM172BPA6NC97 362 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 EFCAB10A6NFE3 127 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 FAM90A22PA8MWA6 464 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 HSPB6O14558 160 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 KCNAB3O43448 404 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 WIPF1O43516 503 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 GPX5O75715 221 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 IGLV1-47P01700 117 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 IGFBP3P17936 291 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-216ENST00000494613 C21orf33P30042 268 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-216ENST00000494613 BDKRB2P30411 391 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 ZNF93P35789 620 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-216ENST00000494613 OR3A4PP47883 348 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 PRRX1P54821 245 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 BLCAPP62952 87 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 BDH1Q02338 343 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 HERPUD1Q15011 391 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 PIGYQ3MUY2 71 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 PAN3Q58A45 887 aaKnown RBP12.55□□□□□ -0.4
LIMS2-216ENST00000494613 UTF1Q5T230 341 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 C11orf88Q6PI97 169 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 ZNF596Q8TC21 504 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 FBLIM1Q8WUP2 373 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 FAM192AQ9GZU8 254 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 METTL9Q9H1A3 318 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 MMP27Q9H306 513 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 ZNF702PQ9H963 129 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 CNOT2Q9NZN8 540 aaKnown RBP12.55□□□□□ -0.4
LIMS2-216ENST00000494613 OR6C3Q9NZP0 311 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 ST3GAL6Q9Y274 331 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 MEGF8Q7Z7M0 2845 aa12.55□□□□□ -0.4
LIMS2-216ENST00000494613 MEIKINA0A087WXM9 373 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 A0A1W2PPK0 400 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 ZNF729A6NN14 1252 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-216ENST00000494613 H3BUI4 141 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 TOR1AO14656 332 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 VSIG10L2P0DP72 767 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 CD34P28906 385 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 PPP3R1P63098 170 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 DEFA6Q01524 100 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 HABP2Q14520 560 aaPredicted RBP12.54□□□□□ -0.4
LIMS2-216ENST00000494613 IL13RA2Q14627 380 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 Q499Y3 187 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 YIF1BQ5BJH7 314 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 DDI2Q5TDH0 399 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 HIST2H2BDQ6DRA6 164 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 Q6ZS46 218 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 Q6ZTK2 550 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 Q8N2B8 174 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 OSR2Q8N2R0 312 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 BPIFB6Q8NFQ5 453 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 TFAP2CQ92754 450 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 PRSS22Q9GZN4 317 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 ZNF286AQ9HBT8 521 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 ZNF581Q9P0T4 197 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 KIF25Q9UIL4 384 aa12.54□□□□□ -0.4
LIMS2-216ENST00000494613 A0A087X0M5 115 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 A0A1B0GX30 115 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 LEUTXA8MZ59 168 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 LY6LH3BQJ8 138 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 BUB1B-PAK6H3BSN5 160 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 CSTBP04080 98 aaKnown RBP12.53□□□□□ -0.4
LIMS2-216ENST00000494613 CD24P25063 80 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 NFYBP25208 207 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 STX19Q8N4C7 294 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 KLHDC1Q8N7A1 406 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 NANOGP1Q8N7R0 232 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 SUMF2Q8NBJ7 301 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 OR13A1Q8NGR1 328 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 RFESDQ8TAC1 157 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 FAM110DQ8TAY7 271 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-216ENST00000494613 PLPPR1Q8TBJ4 325 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 CFHR4Q92496 578 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 PGLYRP3Q96LB9 341 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 S100A13Q99584 98 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 ZNF184Q99676 751 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-216ENST00000494613 DCLRE1BQ9H816 532 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 SERTAD4Q9NUC0 356 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 IL36GQ9NZH8 169 aa12.53□□□□□ -0.4
LIMS2-216ENST00000494613 NKX1-2Q9UD57 310 aaPredicted RBP12.53□□□□□ -0.4
LIMS2-216ENST00000494613 WNK1Q9H4A3 2382 aa12.52□□□□□ -0.4
LIMS2-216ENST00000494613 TRAV8-7A0A075B6U6 113 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 TRBV5-7A0A0A0MS05 114 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 PNMA8CA0A1B0GUJ8 204 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 F2RL2O00254 374 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 TSPAN15O95858 294 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 CELP19835 753 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 RIPK1Q13546 671 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 NHLRC3Q5JS37 347 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 RSBN1Q5VWQ0 802 aaPredicted RBP12.52□□□□□ -0.41
LIMS2-216ENST00000494613 AHSA2Q719I0 299 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 KIRREL1Q96J84 757 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 DPCDQ9BVM2 203 aaPredicted RBP12.52□□□□□ -0.41
LIMS2-216ENST00000494613 IFT22Q9H7X7 185 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 LINC00574Q9H8X3 128 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 PCDHB16Q9NRJ7 776 aa12.52□□□□□ -0.41
LIMS2-216ENST00000494613 PAK1IP1Q9NWT1 392 aaPredicted RBP12.52□□□□□ -0.41
LIMS2-216ENST00000494613 CALYQ9NYX4 217 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms