RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CPT2P23786 658 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 LAP3P28838 519 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 RPL12P30050 165 aaKnown RBP9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 OPRM1P35372 400 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 SUPT4H1P63272 117 aaKnown RBP9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 SRPXP78539 464 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 C17orf67Q0P5P2 114 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 IL13RA2Q14627 380 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 OR7A5Q15622 319 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 SLC25A53Q5H9E4 307 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 OR52W1Q6IF63 320 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 SLC16A14Q7RTX9 510 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 SGPP2Q8IWX5 399 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 ZNF101Q8IZC7 436 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 LRRC18Q8N456 261 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 ZNF321PQ8N8H1 164 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 OR52N4Q8NGI2 321 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 PP6455Q8WZ26 134 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 GALNT14Q96FL9 552 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 ADOQ96SZ5 270 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 GINS3Q9BRX5 216 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 SUCNR1Q9BXA5 334 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 WWTR1Q9GZV5 400 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 OR10A2Q9H208 303 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 HRH4Q9H3N8 390 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 RGCCQ9H4X1 137 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 OPA3Q9H6K4 179 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 FN3KRPQ9HA64 309 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 BCO1Q9HAY6 547 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 TMED3Q9Y3Q3 217 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 FREM1Q5H8C1 2179 aa9.13□□□□□ -0.95
PDLIM1-205ENST00000493949 A0A087WWC5 75 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 LOC102725191A0A1B0GVB3 256 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 FOXI3A8MTJ6 420 aaPredicted RBP9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 UMAD1C9J7I0 102 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 AP4M1O00189 453 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 EIF1BO60739 113 aaKnown RBP9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 NUDT14O95848 222 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 PMP2P02689 132 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 DANCRP0C864 163 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 GNB3P16520 340 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 DTYMKP23919 212 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 SNCAP37840 140 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 EIF1P41567 113 aaKnown RBP9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 RPS27P42677 84 aaKnown RBP9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 LPAR6P43657 344 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 P2RY1P47900 373 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 POLR2GP62487 172 aaKnown RBP eCLIP9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 RAB32Q13637 225 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 ARFRP1Q13795 201 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 DHRS11Q6UWP2 260 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 Q6ZRG5 221 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 GVQW1Q8N7I0 195 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 OR2AJ1Q8NGZ0 328 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 RNF138Q8WVD3 245 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 SLC25A36Q96CQ1 311 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 C1orf147Q96MC9 270 aaPredicted RBP9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 CMSS1Q9BQ75 279 aaKnown RBP9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 RTBDNQ9BSG5 229 aaPredicted RBP9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 UBTD1Q9HAC8 227 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 YAE1D1Q9NRH1 226 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 PNO1Q9NRX1 252 aaKnown RBP9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 OR5AC2Q9NZP5 309 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 CDC42EP3Q9UKI2 254 aa9.12□□□□□ -0.95
PDLIM1-205ENST00000493949 A0A0U1RQV5 110 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 MBD3L3A6NE82 208 aaPredicted RBP9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 CXorf65A6NEN9 183 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 MSGN1A6NI15 193 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 CRYM-AS1A6NIL9 109 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 GPR137BO60478 399 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 IGLV3-1P01715 115 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 IGHG1P01857 330 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 FBP1P09467 338 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 RFPL3SP0C7P2 107 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 ZNF14P17017 642 aaPredicted RBP9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 ZNF708P17019 499 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 RAB5AP20339 215 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 LMO1P25800 156 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 CD80P33681 288 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 KCNJ3P48549 501 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 P2RY4P51582 365 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 RSU1Q15404 277 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 AADACL3Q5VUY0 350 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 GLIPR1L1Q6UWM5 242 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 DPPA3Q6W0C5 159 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 OR5AS1Q8N127 324 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 MAPK1IP1LQ8NDC0 245 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 NOXO1Q8NFA2 376 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 OR13D1Q8NGV5 346 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 OR13G1Q8NGZ3 307 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 MBD3L2Q8NHZ7 208 aaPredicted RBP9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 ADAT3Q96EY9 351 aaPredicted RBP9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 MRGPRX4Q96LA9 322 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 SGCZQ96LD1 299 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 RBM24Q9BX46 236 aaKnown RBP9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 ZMAT3Q9HA38 289 aaKnown RBP9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 SIRT7Q9NRC8 400 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 HSF4Q9ULV5 492 aa9.11□□□□□ -0.95
PDLIM1-205ENST00000493949 KCNIP3Q9Y2W7 256 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms