RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 OR10X1Q8NGY0 326 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 RFT1Q96AA3 541 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 EME1Q96AY2 570 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 RNFT2Q96EX2 444 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 GPER1Q99527 375 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 S100A13Q99584 98 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 RAB9BQ9NP90 201 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 ZFP57Q9NU63 452 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 FAM118AQ9NWS6 357 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 ING3Q9NXR8 418 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 OAZ3Q9UMX2 235 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 DHDHQ9UQ10 334 aa9.24□□□□□ -0.93
COL6A3-213ENST00000493475 IGKV1-9A0A0C4DH69 117 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 TMEM212A6NML5 194 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 SERPINE3A8MV23 424 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 J3QLW9 94 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 DYNC1I1O14576 645 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 FGF16O43320 207 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 SULT1B1O43704 296 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 MPZL2O60487 215 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 FADS2O95864 444 aaKnown RBP9.23□□□□□ -0.93
COL6A3-213ENST00000493475 CD2P06729 351 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 CALCBP10092 127 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 ZNF19P17023 458 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 TMEM11P17152 192 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 CD24P25063 80 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 IL3RAP26951 378 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 KIR3DL2P43630 455 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 ISL1P61371 349 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 ZNF85Q03923 595 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 ATXN7L3Q14CW9 347 aaPredicted RBP9.23□□□□□ -0.93
COL6A3-213ENST00000493475 PAN3Q58A45 887 aaKnown RBP9.23□□□□□ -0.93
COL6A3-213ENST00000493475 Q6ZS46 218 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 AMIGO2Q86SJ2 522 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 OR8H3Q8N146 312 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 OR10A7Q8NGE5 316 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 OR5D18Q8NGL1 313 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 TSEN15Q8WW01 171 aaKnown RBP9.23□□□□□ -0.93
COL6A3-213ENST00000493475 SLC7A6OSQ96CW6 309 aaPredicted RBP9.23□□□□□ -0.93
COL6A3-213ENST00000493475 Q96MT0 163 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 NCOR1P1Q9H4R4 102 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 ZNF286AQ9HBT8 521 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 INPP5EQ9NRR6 644 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 FRRS1LQ9P0K9 344 aa9.23□□□□□ -0.93
COL6A3-213ENST00000493475 FAM172BPA6NC97 362 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 H0YJX3 145 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 SLC33A1O00400 549 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-213ENST00000493475 RRP9O43818 475 aaKnown RBP9.22□□□□□ -0.93
COL6A3-213ENST00000493475 MMP23AO75900 390 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 JUNBP17275 347 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-213ENST00000493475 RAB3AP20336 220 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 ALKBH1Q13686 389 aaKnown RBP9.22□□□□□ -0.93
COL6A3-213ENST00000493475 RSU1Q15404 277 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 KISS1Q15726 138 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 SLC25A30Q5SVS4 291 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 SYS1Q8N2H4 156 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 OR5AK2Q8NH90 309 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 C4orf36Q96KX1 117 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 FAM192AQ9GZU8 254 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 PAK1IP1Q9NWT1 392 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-213ENST00000493475 CHCHD3Q9NX63 227 aaKnown RBP9.22□□□□□ -0.93
COL6A3-213ENST00000493475 CALYQ9NYX4 217 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 MYRFQ9Y2G1 1151 aa9.22□□□□□ -0.93
COL6A3-213ENST00000493475 J3QR06 171 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 HSPB6O14558 160 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 RAMP3O60896 148 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 IL1AP01583 271 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 CSTBP04080 98 aaKnown RBP9.21□□□□□ -0.94
COL6A3-213ENST00000493475 SNRNP70P08621 437 aaKnown RBP9.21□□□□□ -0.94
COL6A3-213ENST00000493475 GZMHP20718 246 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 MYCNOSP40205 109 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 GBX2P52951 348 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-213ENST00000493475 SNRPGP62308 76 aaKnown RBP9.21□□□□□ -0.94
COL6A3-213ENST00000493475 RPL23AP62750 156 aaKnown RBP9.21□□□□□ -0.94
COL6A3-213ENST00000493475 PPP3R1P63098 170 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 IL13RA2Q14627 380 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 ZNF691Q5VV52 312 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 SLC35E3Q7Z769 313 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 PXT1Q8NFP0 134 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 OR51T1Q8NGJ9 327 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 OR56B4Q8NH76 319 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 KIRREL1Q96J84 757 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 NR1H4Q96RI1 486 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-213ENST00000493475 ALG8Q9BVK2 526 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 IDI2-AS1Q9NZ38 188 aa9.21□□□□□ -0.94
COL6A3-213ENST00000493475 IGKV1-12A0A0C4DH73 117 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 SAC3D1A6NKF1 404 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 LY6LH3BQJ8 138 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 K7EIL1 84 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 AP4M1O00189 453 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 IGKV1D-12P01611 117 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 GAPDHP04406 335 aaKnown RBP9.2□□□□□ -0.94
COL6A3-213ENST00000493475 DGCR2P98153 550 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 EGFEM1PQ0D2K5 195 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 GALEQ14376 348 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 TCTEX1D4Q5JR98 221 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 ELP2Q6IA86 826 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 TEX38Q6PEX7 206 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 LINC00596Q86U02 117 aa9.2□□□□□ -0.94
COL6A3-213ENST00000493475 SATL1Q86VE3 508 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms