RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 SLC25A19Q9HC21 320 aa11.06□□□□□ -0.64
PRPF40A-211ENST00000493468 MRM2Q9UI43 246 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-211ENST00000493468 PSG11Q9UQ72 335 aa11.06□□□□□ -0.64
PRPF40A-211ENST00000493468 GSTK1Q9Y2Q3 226 aa11.06□□□□□ -0.64
PRPF40A-211ENST00000493468 OVOL1O14753 267 aa11.05□□□□□ -0.64
PRPF40A-211ENST00000493468 HSD17B6O14756 317 aa11.05□□□□□ -0.64
PRPF40A-211ENST00000493468 POU3F4P49335 361 aa11.05□□□□□ -0.64
PRPF40A-211ENST00000493468 BNIP1Q12981 228 aa11.05□□□□□ -0.64
PRPF40A-211ENST00000493468 PLEKHG7Q6ZR37 379 aa11.05□□□□□ -0.64
PRPF40A-211ENST00000493468 LYPD6Q86Y78 171 aa11.05□□□□□ -0.64
PRPF40A-211ENST00000493468 OR10A7Q8NGE5 316 aa11.05□□□□□ -0.64
PRPF40A-211ENST00000493468 OR2T10Q8NGZ9 312 aa11.05□□□□□ -0.64
PRPF40A-211ENST00000493468 OSBPL10Q9BXB5 764 aa11.05□□□□□ -0.64
PRPF40A-211ENST00000493468 CALYQ9NYX4 217 aa11.05□□□□□ -0.64
PRPF40A-211ENST00000493468 IDI2-AS1Q9NZ38 188 aa11.05□□□□□ -0.64
PRPF40A-211ENST00000493468 IGHV1-3A0A0C4DH29 117 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 NPIPB11E5RHQ5 1161 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 SLC33A1O00400 549 aaPredicted RBP11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 SAP30O75446 220 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 KDM4BO94953 1096 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 IL1AP01583 271 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 IGHV4-30-4P0DP06 118 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 CALCBP10092 127 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 ZNF44P15621 663 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 KIR3DL2P43630 455 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 ISL1P61371 349 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 PDZK1IP1Q13113 114 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 KIAA0141Q14154 515 aaPredicted RBP11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 ATXN7L3Q14CW9 347 aaPredicted RBP11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 Q6P435 159 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 LHFPL2Q6ZUX7 228 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 CATSPERDQ86XM0 798 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 ZNF491Q8N8L2 437 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 ZNF565Q8N9K5 539 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 OR8H1Q8NGG4 311 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 OR10X1Q8NGY0 326 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 DCUN1D4Q92564 292 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 LEAP2Q969E1 77 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 KCTD7Q96MP8 289 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 SPATA25Q9BR10 227 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 PPIL3Q9H2H8 161 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 GNB4Q9HAV0 340 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 PLSCR3Q9NRY6 295 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 C19orf73Q9NVV2 129 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 VSIG4Q9Y279 399 aa11.04□□□□□ -0.64
PRPF40A-211ENST00000493468 PCLOQ9Y6V0 5065 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 MAGEB4O15481 346 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 GAPDHP04406 335 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 PRKACBP22694 351 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 MYF6P23409 242 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 GLP1RP43220 463 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 MTCP1P56278 107 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 GNB1P62873 340 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 PAX5Q02548 391 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 FAM98BQ52LJ0 330 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 UTS2BQ765I0 119 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 SLC35F2Q8IXU6 374 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 OR51T1Q8NGJ9 327 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 IL17DQ8TAD2 202 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 SPSB1Q96BD6 273 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 S1PR3Q99500 378 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 RASL11BQ9BPW5 248 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 HSPB9Q9BQS6 159 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 OR51J1Q9H342 316 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 GHITMQ9H3K2 345 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 CLN6Q9NWW5 311 aa11.03□□□□□ -0.64
PRPF40A-211ENST00000493468 IGKV1-9A0A0C4DH69 117 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 IGKV1-12A0A0C4DH73 117 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 ZNF670-ZNF695F2Z2N8 137 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 MOSP00540 346 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 IGKV1D-12P01611 117 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 IGHV3-7P01780 117 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 CD1BP29016 333 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 C21orf33P30042 268 aaPredicted RBP11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 PPIFP30405 207 aaKnown RBP11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 SOX6P35712 828 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 GNG10P50151 68 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 ZP1P60852 638 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 GABPB1Q06547 395 aaPredicted RBP11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 ODF4Q2M2E3 257 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 ACSM6Q6P461 480 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 MOB3BQ86TA1 216 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 TMEM104Q8NE00 496 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 OR13A1Q8NGR1 328 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 ADI1Q9BV57 179 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 ZNF556Q9HAH1 456 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 ADGRL4Q9HBW9 690 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 NDE1Q9NXR1 346 aa11.02□□□□□ -0.65
PRPF40A-211ENST00000493468 TNCP24821 2201 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 IGHV3-72A0A0B4J1Y9 119 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 LOC107986453A0A1B0GWG9 222 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 IGLV1-40P01703 118 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 KRT8P05787 483 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 OR8U9P0C7N5 309 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 UBCP0CG48 685 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 ATF1P18846 271 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 MNAT1P51948 309 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 SCN1BQ07699 218 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 SRSF7Q16629 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 TMEM236Q5W0B7 351 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms