RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 FBXO25Q8TCJ0 367 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 MBD3L1Q8WWY6 194 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 MRPL24Q96A35 216 aaKnown RBP3.53□□□□□ -1.84
BRCA1-220ENST00000492859 GMPPAQ96IJ6 420 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-220ENST00000492859 SIGLEC12Q96PQ1 595 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 GPHA2Q96T91 129 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 MACROD1Q9BQ69 325 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 SPATA25Q9BR10 227 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 ANAPC13Q9BS18 74 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 OR2D2Q9H210 308 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 HES4Q9HCC6 221 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 COMMD9Q9P000 198 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 MRPL27Q9P0M9 148 aaKnown RBP3.53□□□□□ -1.84
BRCA1-220ENST00000492859 KLK11Q9UBX7 282 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 MMP17Q9ULZ9 603 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 BOKQ9UMX3 212 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-220ENST00000492859 VDAC3Q9Y277 283 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 BTRCQ9Y297 605 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 AP4S1Q9Y587 144 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 OVOS2A0A0G2JMS6 1433 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 PNMA8CA0A1B0GUJ8 204 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 LOC102725191A0A1B0GVB3 256 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 C2CD4DB7Z1M9 353 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 EEF1E1-BLOC1S5C9J1V9 151 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 C9JAW5 83 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 TMEM178BH3BS89 294 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 CCL21O00585 134 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 EEF1E1O43324 174 aaKnown RBP3.52□□□□□ -1.85
BRCA1-220ENST00000492859 NCR1O76036 304 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 NDUFB8O95169 186 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 SEMA4FO95754 770 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 APOC3P02656 99 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 CSN2P05814 226 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 IL3P08700 152 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 FAM157CP0CG43 387 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 CXCL3P19876 107 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 CTGFP29279 349 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 G6PCP35575 357 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 ARL2P36404 184 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 TFPI2P48307 235 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 GNG4P50150 75 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 POLR2HP52434 150 aaKnown RBP3.52□□□□□ -1.85
BRCA1-220ENST00000492859 SLC35A2P78381 396 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 IFITM3Q01628 133 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 GNA12Q03113 381 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 PSG7Q13046 419 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 JOSD1Q15040 202 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-220ENST00000492859 CLEC12BQ2HXU8 276 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 GLYATL3Q5SZD4 288 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 OR2T5Q6IEZ7 315 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 GLIPR1L1Q6UWM5 242 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 SLC22A15Q8IZD6 547 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 OR2G3Q8NGZ4 309 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 OR2T4Q8NH00 348 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 OR2T29Q8NH02 315 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 BLNKQ8WV28 456 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 EEF1AKMT3Q96AZ1 226 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 BORCS7Q96B45 105 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 RTBDNQ9BSG5 229 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-220ENST00000492859 SPRY4Q9C004 299 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 ZBP1Q9H171 429 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 IFI27L2Q9H2X8 130 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 OR52D1Q9H346 318 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 MMP26Q9NRE1 261 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 TBX21Q9UL17 535 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 HIGD1AQ9Y241 93 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 U3KQE9 123 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 PZPP20742 1482 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 FRMPD1Q5SYB0 1578 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 ARID2Q68CP9 1835 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 BRCA1P38398 1863 aaKnown RBP3.52□□□□□ -1.85
BRCA1-220ENST00000492859 VWA8A3KMH1 1905 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 MYH6P13533 1939 aa3.52□□□□□ -1.85
BRCA1-220ENST00000492859 ARID1BQ8NFD5 2236 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-220ENST00000492859 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 FAM240AA0A1B0GVK7 77 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 IFITM10A6NMD0 228 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 ZNF850A8MQ14 1090 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 SMKR1H3BMG3 65 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 K7EQS6 105 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 GAPDHSO14556 408 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 PHOX2AO14813 284 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 BUB3O43684 328 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 GPR137BO60478 399 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 EDF1O60869 148 aaKnown RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 ZNF432O94892 652 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 YIF1AO95070 293 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 NDUFB4O95168 129 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 IGKV5-2P06315 115 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 OR5G3P0C626 314 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 GNB3P16520 340 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 BCL3P20749 454 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 GABRA3P34903 492 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 SOX3P41225 446 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 PTH2RP49190 550 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 TAS2R20P59543 309 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 RPL18AQ02543 176 aaKnown RBP3.51□□□□□ -1.85
BRCA1-220ENST00000492859 HSD52Q0P140 79 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 TAF10Q12962 218 aa3.51□□□□□ -1.85
BRCA1-220ENST00000492859 TIMM50Q3ZCQ8 353 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms