RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ZNF729A6NN14 1252 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 LEUTXA8MZ59 168 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 H3BQ85 93 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 I3L4J1 428 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 K7ERS5 55 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 POLR3GO15318 223 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 TNFAIP8O95379 198 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 EPPINO95925 133 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 P0C880 135 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 HRES1P13985 223 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 SPNP16150 400 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 CNTFRP26992 372 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 PSMB9P28065 219 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 TGFBR2P37173 567 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 KLF3P57682 345 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 BAMBIQ13145 260 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 BIKQ13323 160 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 RAB31Q13636 194 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 ANGPT1Q15389 498 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 SYCP1Q15431 976 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 GOLGA7BQ2TAP0 167 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 TMEM249Q2WGJ8 235 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 PDZD11Q5EBL8 140 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 FAM162BQ5T6X4 162 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 NXNL2Q5VZ03 156 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF660Q6AZW8 331 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 WDR59Q6PJI9 974 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 ADM2Q7Z4H4 148 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 CALHM3Q86XJ0 350 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF738Q8NE65 137 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 ANGPTL6Q8NI99 470 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 CASTOR1Q8WTX7 329 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 GTF2H4Q92759 462 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 CCDC127Q96BQ5 260 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 HBEGFQ99075 208 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 FAAP24Q9BTP7 215 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 PLA2G12AQ9BZM1 189 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 SPACA1Q9HBV2 294 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 MS4A12Q9NXJ0 267 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 TAS2R13Q9NYV9 303 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 ICOSQ9Y6W8 199 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF407Q9C0G0 2248 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 MIA3Q5JRA6 1907 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 FBN1P35555 2871 aaKnown RBP1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 NUP205Q92621 2012 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 TRAV8-2A0A0B4J237 113 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 ERICH2A1L162 156 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 A8MWP4 228 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 C4orf51C9J302 202 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 TMEM250H0YL14 139 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 MKRN2OSH3BPM6 223 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 C15orf65H3BRN8 121 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 SULT1C2O00338 296 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 POP7O75817 140 aaKnown RBP1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 KLHL2O95198 593 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 SNAP29O95721 258 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 IGKV1D-33P01593 117 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 IGKV1-33P01594 117 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 IGHV3-53P01767 116 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 HLA-AP01891 365 aaKnown RBP1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 MLNP12872 115 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 GTF2F2P13984 249 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 CD34P28906 385 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 PYCR1P32322 319 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 KDELR2P33947 212 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 RAB25P57735 213 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 SLAMF1Q13291 335 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 SLC9A3R2Q15599 337 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 RBM48Q5RL73 367 aaKnown RBP1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 CLEC6AQ6EIG7 209 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 ELP2Q6IA86 826 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 LAIR2Q6ISS4 152 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 CLEC20AQ6ZU45 233 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 PAGE2Q7Z2X7 111 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 COMTD1Q86VU5 262 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 RPRMLQ8N4K4 120 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 RNASEH2CQ8TDP1 164 aaKnown RBP1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 MAL2Q969L2 176 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 DDIT4LQ96D03 193 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 OTUB2Q96DC9 234 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 PYURFQ96I23 114 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 FAM210AQ96ND0 272 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 PRSS27Q9BQR3 290 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 TM2D3Q9BRN9 247 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 MED10Q9BTT4 135 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 TAPBPLQ9BX59 468 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 ULBP1Q9BZM6 244 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 GABARAPL1Q9H0R8 117 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 DSN1Q9H410 356 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 FBXL15Q9H469 300 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 METTL17Q9H7H0 456 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 BTRCQ9Y297 605 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 TBL2Q9Y4P3 447 aaKnown RBP1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 TRAPPC1Q9Y5R8 145 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 GMEB1Q9Y692 573 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 URGCP-MRPS24S4R325 110 aa1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 BAZ1BQ9UIG0 1483 aaKnown RBP1.34□□□□□ -2.19
HMGB1P30-201ENST00000492455 TMEM94Q12767 1356 aa1.34□□□□□ -2.2
HMGB1P30-201ENST00000492455 IGKV2-24A0A0C4DH68 120 aa1.33□□□□□ -2.2
HMGB1P30-201ENST00000492455 C8orf87E5RJ46 101 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms