RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 OGG1O15527 345 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 GPX5O75715 221 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 TMEM225BP0DP42 221 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 CEACAM3P40198 252 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 PTGFRP43088 359 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 KCNJ3P48549 501 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 PRRX1P54821 245 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 IL13RA2Q14627 380 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 TMEM95Q3KNT9 176 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 OXLD1Q5BKU9 147 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 KRBOX4Q5JUW0 171 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 RSBN1Q5VWQ0 802 aaPredicted RBP6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 RPL22L1Q6P5R6 122 aaKnown RBP6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 TRAPPC6BQ86SZ2 158 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 LYG1Q8N1E2 194 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF565Q8N9K5 539 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF485Q8NCK3 441 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 OR5AU1Q8NGC0 362 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 OR10A7Q8NGE5 316 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 OR4D6Q8NGJ1 314 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 OR5D18Q8NGL1 313 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 OR9G1Q8NH87 305 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 CNIH3Q8TBE1 160 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 AKR1E2Q96JD6 320 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 RDH12Q96NR8 316 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 PPIL3Q9H2H8 161 aaKnown RBP6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 S100A14Q9HCY8 104 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 AMBNQ9NP70 447 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 PCDHGB5Q9Y5G0 923 aa6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 SIRT4Q9Y6E7 314 aaPredicted RBP6.67□□□□□ -1.34
SMARCB1-207ENST00000491967 DNAH3Q8TD57 4116 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 H0YJX3 145 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 J3QR06 171 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 M0QZK8 103 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 EBAG9O00559 213 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 GABRPO00591 440 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF44P15621 663 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 RAB3AP20336 220 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 CD24P25063 80 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 DCKP27707 260 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 VDAC2P45880 294 aaPredicted RBP6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 GTF2A1P52655 376 aaPredicted RBP6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 GBX2P52951 348 aaPredicted RBP6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 SNU13P55769 128 aaKnown RBP6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 GABPB1Q06547 395 aaPredicted RBP6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 EBI3Q14213 229 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 NSUN5P1Q3KNT7 163 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 XAF1Q6GPH4 301 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 CCDC144NLQ6NUI1 221 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 PQLC1Q8N2U9 271 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 C8orf31Q8N9H6 132 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 OR51A2Q8NGJ7 313 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 OR13A1Q8NGR1 328 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 GPR148Q8TDV2 347 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 R3HDM4Q96D70 268 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 CPNE2Q96FN4 548 aaPredicted RBP6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 SLC25A33Q9BSK2 321 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 BARHL1Q9BZE3 327 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 PCDHB16Q9NRJ7 776 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 KIF25Q9UIL4 384 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 DHDHQ9UQ10 334 aa6.66□□□□□ -1.34
SMARCB1-207ENST00000491967 TRBV5-5A0A0J9YX44 114 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 A0A1W2PPI3 338 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 TOR1AO14656 332 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 IL1AP01583 271 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 HCKP08631 526 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM106CPP0CH98 169 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 IGFBP3P17936 291 aaPredicted RBP6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 GZMHP20718 246 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 C21orf33P30042 268 aaPredicted RBP6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 ETV1P50549 477 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 ARHGDIBP52566 201 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 LOXL3P58215 753 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 RPS11P62280 158 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 SCN1BQ07699 218 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 ATXN7L3Q14CW9 347 aaPredicted RBP6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 SMN1Q16637 294 aaKnown RBP6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 ABCA11PQ4W5N1 156 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 DMKNQ6E0U4 476 aaPredicted RBP6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 CCDC121Q6ZUS5 278 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 CENPVQ7Z7K6 275 aaPredicted RBP6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 LYPD6Q86Y78 171 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 GAPTQ8N292 157 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 OSR2Q8N2R0 312 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 OR52M1Q8NGK5 317 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 PLPPR1Q8TBJ4 325 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 STMN2Q93045 179 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 PHF21AQ96BD5 680 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 OR5M11Q96RB7 305 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 TMEM138Q9NPI0 162 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 NECAP2Q9NVZ3 263 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 BABAM2Q9NXR7 383 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 CALYQ9NYX4 217 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 IDI2-AS1Q9NZ38 188 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF581Q9P0T4 197 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 DIMT1Q9UNQ2 313 aaKnown RBP6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 PSG11Q9UQ72 335 aa6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 TSSC4Q9Y5U2 329 aaPredicted RBP6.65□□□□□ -1.34
SMARCB1-207ENST00000491967 MEIKINA0A087WXM9 373 aa6.64□□□□□ -1.35
SMARCB1-207ENST00000491967 FAM172BPA6NC97 362 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms