RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 RAB7AP51149 207 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 ZP1P60852 638 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 BLCAPP62952 87 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 PPP3R1P63098 170 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 CD83Q01151 205 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 SCN1BQ07699 218 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 HABP2Q14520 560 aaPredicted RBP7.01□□□□□ -1.29
NUP50-217ENST00000491860 RSU1Q15404 277 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 ZIK1Q3SY52 487 aaPredicted RBP7.01□□□□□ -1.29
NUP50-217ENST00000491860 PAN3Q58A45 887 aaKnown RBP7.01□□□□□ -1.29
NUP50-217ENST00000491860 LPCAT4Q643R3 524 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 Q6P435 159 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 TMPRSS11AQ6ZMR5 421 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 LHFPL3Q86UP9 236 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 OR8H3Q8N146 312 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 CBR4Q8N4T8 237 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 ZNF555Q8NEP9 628 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 WFDC9Q8NEX5 89 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 Q8NFD4 153 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 OR51A4Q8NGJ6 313 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 OR5D18Q8NGL1 313 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 RHOXF1Q8NHV9 184 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 GPR148Q8TDV2 347 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 SGCDQ92629 289 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 RFT1Q96AA3 541 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 S100A13Q99584 98 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 MMP28Q9H239 520 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 C8orf4Q9NR00 106 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 ZMAT5Q9UDW3 170 aaKnown RBP7.01□□□□□ -1.29
NUP50-217ENST00000491860 MOB4Q9Y3A3 225 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 HSPE1-MOB4S4R3N1 261 aa7.01□□□□□ -1.29
NUP50-217ENST00000491860 MEIKINA0A087WXM9 373 aa7□□□□□ -1.29
NUP50-217ENST00000491860 TCRBV4S1A1TA0A5B7 111 aa7□□□□□ -1.29
NUP50-217ENST00000491860 MEX3AA1L020 520 aaKnown RBP7□□□□□ -1.29
NUP50-217ENST00000491860 H3BNX3 289 aa7□□□□□ -1.29
NUP50-217ENST00000491860 FGF16O43320 207 aa7□□□□□ -1.29
NUP50-217ENST00000491860 IL1AP01583 271 aa7□□□□□ -1.29
NUP50-217ENST00000491860 CSTBP04080 98 aaKnown RBP7□□□□□ -1.29
NUP50-217ENST00000491860 LPLP06858 475 aa7□□□□□ -1.29
NUP50-217ENST00000491860 MYL12AP19105 171 aa7□□□□□ -1.29
NUP50-217ENST00000491860 GZMHP20718 246 aa7□□□□□ -1.29
NUP50-217ENST00000491860 NFYBP25208 207 aa7□□□□□ -1.29
NUP50-217ENST00000491860 GLP1RP43220 463 aa7□□□□□ -1.29
NUP50-217ENST00000491860 LOXL3P58215 753 aa7□□□□□ -1.29
NUP50-217ENST00000491860 SLC35A2P78381 396 aa7□□□□□ -1.29
NUP50-217ENST00000491860 MADCAM1Q13477 382 aa7□□□□□ -1.29
NUP50-217ENST00000491860 DCTN2Q13561 401 aaKnown RBP7□□□□□ -1.29
NUP50-217ENST00000491860 GPR176Q14439 515 aa7□□□□□ -1.29
NUP50-217ENST00000491860 ATXN7L3Q14CW9 347 aaPredicted RBP7□□□□□ -1.29
NUP50-217ENST00000491860 CDK5R1Q15078 307 aa7□□□□□ -1.29
NUP50-217ENST00000491860 TMEM30BQ3MIR4 351 aa7□□□□□ -1.29
NUP50-217ENST00000491860 NHLRC3Q5JS37 347 aa7□□□□□ -1.29
NUP50-217ENST00000491860 ZNF529Q6P280 563 aa7□□□□□ -1.29
NUP50-217ENST00000491860 RPL22L1Q6P5R6 122 aaKnown RBP7□□□□□ -1.29
NUP50-217ENST00000491860 Q6ZPA2 131 aa7□□□□□ -1.29
NUP50-217ENST00000491860 COMMD1Q8N668 190 aa7□□□□□ -1.29
NUP50-217ENST00000491860 OR51D1Q8NGF3 324 aa7□□□□□ -1.29
NUP50-217ENST00000491860 OR10AC1Q8NH08 325 aa7□□□□□ -1.29
NUP50-217ENST00000491860 CNIH3Q8TBE1 160 aa7□□□□□ -1.29
NUP50-217ENST00000491860 TNFAIP8L1Q8WVP5 186 aa7□□□□□ -1.29
NUP50-217ENST00000491860 TOMM40LQ969M1 308 aa7□□□□□ -1.29
NUP50-217ENST00000491860 COQ2Q96H96 371 aa7□□□□□ -1.29
NUP50-217ENST00000491860 RCC1LQ96I51 464 aaKnown RBP7□□□□□ -1.29
NUP50-217ENST00000491860 KIRREL1Q96J84 757 aa7□□□□□ -1.29
NUP50-217ENST00000491860 SPACA5Q96QH8 159 aa7□□□□□ -1.29
NUP50-217ENST00000491860 FAM192AQ9GZU8 254 aa7□□□□□ -1.29
NUP50-217ENST00000491860 METTL9Q9H1A3 318 aa7□□□□□ -1.29
NUP50-217ENST00000491860 IFT22Q9H7X7 185 aa7□□□□□ -1.29
NUP50-217ENST00000491860 LINC00574Q9H8X3 128 aa7□□□□□ -1.29
NUP50-217ENST00000491860 ZNF286AQ9HBT8 521 aa7□□□□□ -1.29
NUP50-217ENST00000491860 SPACA1Q9HBV2 294 aa7□□□□□ -1.29
NUP50-217ENST00000491860 FAM118AQ9NWS6 357 aa7□□□□□ -1.29
NUP50-217ENST00000491860 CHCHD3Q9NX63 227 aaKnown RBP7□□□□□ -1.29
NUP50-217ENST00000491860 IDI2-AS1Q9NZ38 188 aa7□□□□□ -1.29
NUP50-217ENST00000491860 IL36GQ9NZH8 169 aa7□□□□□ -1.29
NUP50-217ENST00000491860 NPIPB11E5RHQ5 1161 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 LY6LH3BQJ8 138 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 J3QR06 171 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 GABRPO00591 440 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 MMP23AO75900 390 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 CALCBP10092 127 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 RBM39Q14498 530 aaKnown RBP6.99□□□□□ -1.29
NUP50-217ENST00000491860 MPV17LQ2QL34 196 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 Q3ZCU0 254 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 ABCA11PQ4W5N1 156 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 ASCL4Q6XD76 172 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 SATL1Q86VE3 508 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 OSR2Q8N2R0 312 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 PQLC1Q8N2U9 271 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 OR51A2Q8NGJ7 313 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 OR52M1Q8NGK5 317 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 OR52I1Q8NGK6 324 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 MRAPQ8TCY5 172 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 CHPT1Q8WUD6 406 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 THRSPQ92748 146 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 DPF1Q92782 380 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 OR5M11Q96RB7 305 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 NR1H4Q96RI1 486 aaPredicted RBP6.99□□□□□ -1.29
NUP50-217ENST00000491860 PDCD1LG2Q9BQ51 273 aa6.99□□□□□ -1.29
NUP50-217ENST00000491860 GON7Q9BXV9 100 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms