RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TMEM106AQ96A25 262 aa13.39□□□□□ -0.27
PDLIM2-217ENST00000491330 RAB9BQ9NP90 201 aa13.39□□□□□ -0.27
PDLIM2-217ENST00000491330 FKBP14Q9NWM8 211 aa13.39□□□□□ -0.27
PDLIM2-217ENST00000491330 ANK2Q01484 3957 aa13.39□□□□□ -0.27
PDLIM2-217ENST00000491330 MEIKINA0A087WXM9 373 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 IGKV1-12A0A0C4DH73 117 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 MEGF11A6BM72 1044 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 OOSP1A8MZH6 123 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 ANKRD65E5RJM6 399 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 GPX5O75715 221 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 IGKV1D-12P01611 117 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 GNAO1P09471 354 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 MAPK3P27361 379 aaPredicted RBP13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 GLIPR1P48060 266 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 RAB13P51153 203 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 Q499Y3 187 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 CDH26Q8IXH8 852 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 NCOR1P1Q9H4R4 102 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 ING4Q9UNL4 249 aa13.38□□□□□ -0.27
PDLIM2-217ENST00000491330 A6NDX4 124 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 M0QZK8 103 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 SLC33A1O00400 549 aaPredicted RBP13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 FBXO24O75426 580 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 HTR3BO95264 441 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 FSTP19883 344 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 NFYBP25208 207 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 BDKRB2P30411 391 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 ZNF93P35789 620 aaPredicted RBP13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 GTF2A1P52655 376 aaPredicted RBP13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 KRTAP10-3P60369 221 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 RIPK1Q13546 671 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 RBM39Q14498 530 aaKnown RBP13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 ATXN7L3Q14CW9 347 aaPredicted RBP13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 PRAMEF5Q5TYX0 476 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 LINC00596Q86U02 117 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 BPIFB6Q8NFQ5 453 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 GHSRQ92847 366 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 MND1Q9BWT6 205 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 ANKRD60Q9BZ19 345 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 SIGLEC9Q9Y336 463 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 TPRKBQ9Y3C4 175 aa13.37□□□□□ -0.27
PDLIM2-217ENST00000491330 TRBV5-5A0A0J9YX44 114 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 WIPF1O43516 503 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 FAM106CPP0CH98 169 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 GLP1RP43220 463 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 VDAC2P45880 294 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 ZP1P60852 638 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 GPR50Q13585 617 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 C6orf141Q5SZD1 244 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 CRIP3Q6Q6R5 217 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 AHSA2Q719I0 299 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 TMEM219Q86XT9 240 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 OSR2Q8N2R0 312 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 MS4A15Q8N5U1 240 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 NANOGP1Q8N7R0 232 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 Q8NFD4 153 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 OR4F17Q8NGA8 305 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 OR9G1Q8NH87 305 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 PIFOQ8TCI5 191 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 RPEQ96AT9 228 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 OR4F4Q96R69 305 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 TAS2R4Q9NYW5 299 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 IL36GQ9NZH8 169 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 NKX1-2Q9UD57 310 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 CLEC2DQ9UHP7 191 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 FOXJ3Q9UPW0 622 aa13.36□□□□□ -0.27
PDLIM2-217ENST00000491330 KBTBD11-OT1A0A1B0GTJ5 212 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 HSPB6O14558 160 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 XPNPEP2O43895 674 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 CHST1O43916 411 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 CDK1P06493 297 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 GTF2F2P13984 249 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 GZMHP20718 246 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 MYF6P23409 242 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 PAX6P26367 422 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 PAX5Q02548 391 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 PDLIM3Q53GG5 364 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 NHLRC3Q5JS37 347 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 DDI2Q5TDH0 399 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 XAF1Q6GPH4 301 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 LAIR2Q6ISS4 152 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 Q6P435 159 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 ASCL4Q6XD76 172 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 SLC16A12Q6ZSM3 486 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 Q8N2B8 174 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 C11orf44Q8N8P7 122 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 OR10A7Q8NGE5 316 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 OR51A2Q8NGJ7 313 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 OR51T1Q8NGJ9 327 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 NEK7Q8TDX7 302 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 RGP1Q92546 391 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 PGLYRP3Q96LB9 341 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 LIN7BQ9HAP6 207 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 SPACA1Q9HBV2 294 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 ST3GAL6Q9Y274 331 aa13.35□□□□□ -0.27
PDLIM2-217ENST00000491330 GABRPO00591 440 aa13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 OR7C1O76099 320 aaPredicted RBP13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 CD34P28906 385 aa13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 RANBP1P43487 201 aa13.34□□□□□ -0.27
PDLIM2-217ENST00000491330 AQP4P55087 323 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms