RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 PTX4Q96A99 478 aa8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 DACT3Q96B18 629 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 KCTD12Q96CX2 325 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 NEDD4LQ96PU5 975 aa8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 NUDT16L1Q9BRJ7 211 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 HDHD3Q9BSH5 251 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 FAAP24Q9BTP7 215 aa8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 MRI1Q9BV20 369 aa8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 PECRQ9BY49 303 aa8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 SLIRPQ9GZT3 109 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 ZMAT3Q9HA38 289 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 PLEKHJ1Q9NW61 149 aa8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 KIF25Q9UIL4 384 aa8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 RPUSD1Q9UJJ7 312 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 ELF5Q9UKW6 265 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 KIAA2026Q5HYC2 2103 aa8.89□□□□□ -0.99
CACNA1C-227ENST00000491104 METTL21EPA6NDL7 271 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 CTDSP2O14595 271 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 TMEM127O75204 238 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 PTHLHP12272 177 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 GNB3P16520 340 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 CCL3L1P16619 93 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 DLX1P56177 255 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 P2RX3P56373 397 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 RPL31P62899 125 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 PAX2Q02962 417 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 MZT2AQ6P582 158 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 Q6ZTK2 550 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 GLCCI1Q86VQ1 547 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 LAX1Q8IWV1 398 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 OR4K15Q8NH41 348 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 CCDC107Q8WV48 283 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 RAB40AQ8WXH6 277 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 ACOT12Q8WYK0 555 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 AP3S1Q92572 193 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 TMEM186Q96B77 213 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 RAB3CQ96E17 227 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 C6orf62Q9GZU0 229 aaPredicted RBP8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 MIXL1Q9H2W2 232 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 GSX1Q9H4S2 264 aaPredicted RBP8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 SPACA1Q9HBV2 294 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 HIF1ANQ9NWT6 349 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 ETAA1Q9NY74 926 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 AK3Q9UIJ7 227 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 KCNK7Q9Y2U2 307 aa8.88□□□□□ -0.99
CACNA1C-227ENST00000491104 ABCA1O95477 2261 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 ITPR3Q14573 2671 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 TRAV18A0A075B6X5 111 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 MEIKINA0A087WXM9 373 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 PPIAL4CA0A0B4J2A2 164 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 ODAMA1E959 279 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 FAM25AB3EWG3 89 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 FAM25CB3EWG5 89 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 FAM25GB3EWG6 89 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 MFNGO00587 321 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 RGS5O15539 181 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 ENSAO43768 121 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 CD5LO43866 347 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 LY6G6DO95868 133 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 CSN2P05814 226 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 PPIAL4GP0DN37 164 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 HIST1H1DP16402 221 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 ELK1P19419 428 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 CDK2P24941 298 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 GLP1RP43220 463 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 KCNJ3P48549 501 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 DVL1P1P54792 670 aaPredicted RBP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 ERVFRD-1P60508 538 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 PRB3Q04118 309 aaPredicted RBP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 DYNC1I2Q13409 638 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 RBM39Q14498 530 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 CD276Q5ZPR3 534 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 Q6ZPA2 131 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 Q71RC1 249 aaPredicted RBP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 C5orf24Q7Z6I8 188 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 TRAPPC6BQ86SZ2 158 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 LY6G5BQ8NDX9 201 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 OR13A1Q8NGR1 328 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 MCFD2Q8NI22 146 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 C8orf46Q8TAG6 207 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 UBALD1Q8TB05 177 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 MRPL30Q8TCC3 161 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 GCDHQ92947 438 aaPredicted RBP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 NXF2Q9GZY0 626 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 ABCG5Q9H222 651 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 YAE1D1Q9NRH1 226 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 ONECUT1Q9UBC0 465 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 POLR3KQ9Y2Y1 108 aaPredicted RBP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 INSIG2Q9Y5U4 225 aa8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.87□□□□□ -0.99
CACNA1C-227ENST00000491104 WNK2Q9Y3S1 2297 aa8.86□□□□□ -0.99
CACNA1C-227ENST00000491104 TRBV23-1A0A0A0MS06 115 aa8.86□□□□□ -0.99
CACNA1C-227ENST00000491104 TRAV20A0A0B4J274 112 aa8.86□□□□□ -0.99
CACNA1C-227ENST00000491104 TMEM30CPA0ZSE6 113 aa8.86□□□□□ -0.99
CACNA1C-227ENST00000491104 TMEM235A6NFC5 223 aa8.86□□□□□ -0.99
CACNA1C-227ENST00000491104 ECDO95905 644 aaPredicted RBP8.86□□□□□ -0.99
CACNA1C-227ENST00000491104 LIPFP07098 398 aa8.86□□□□□ -0.99
CACNA1C-227ENST00000491104 ERP29P30040 261 aaKnown RBP8.86□□□□□ -0.99
CACNA1C-227ENST00000491104 ARF6P62330 175 aa8.86□□□□□ -0.99
CACNA1C-227ENST00000491104 CNPY1Q3B7I2 92 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms