RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 OR2F2O95006 317 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 RPSAP08865 295 aaKnown RBP16.75■□□□□ 0.27
SYNE4-205ENST00000490730 MNDAP41218 407 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 SOX2P48431 317 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 RAB40BQ12829 278 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 MRPL28Q13084 256 aaKnown RBP16.75■□□□□ 0.27
SYNE4-205ENST00000490730 C17orf58Q2M2W7 97 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 KHDC1LQ5JSQ8 128 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 UTF1Q5T230 341 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 CCDC144NLQ6NUI1 221 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 RHOXF1Q8NHV9 184 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 TNFAIP8L1Q8WVP5 186 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 PHF21AQ96BD5 680 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 CPNE2Q96FN4 548 aaPredicted RBP16.75■□□□□ 0.27
SYNE4-205ENST00000490730 RBM14Q96PK6 669 aaKnown RBP16.75■□□□□ 0.27
SYNE4-205ENST00000490730 NECAP2Q9NVZ3 263 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.75■□□□□ 0.27
SYNE4-205ENST00000490730 KIF25Q9UIL4 384 aa16.75■□□□□ 0.27
SYNE4-205ENST00000490730 KBTBD11-OT1A0A1B0GTJ5 212 aa16.74■□□□□ 0.27
SYNE4-205ENST00000490730 IGHV3-7P01780 117 aa16.74■□□□□ 0.27
SYNE4-205ENST00000490730 RAB3AP20336 220 aa16.74■□□□□ 0.27
SYNE4-205ENST00000490730 CD83Q01151 205 aa16.74■□□□□ 0.27
SYNE4-205ENST00000490730 LTC4SQ16873 150 aa16.74■□□□□ 0.27
SYNE4-205ENST00000490730 OR52I1Q8NGK6 324 aa16.74■□□□□ 0.27
SYNE4-205ENST00000490730 OR10K1Q8NGX5 313 aa16.74■□□□□ 0.27
SYNE4-205ENST00000490730 KIRREL1Q96J84 757 aa16.74■□□□□ 0.27
SYNE4-205ENST00000490730 CALYQ9NYX4 217 aa16.74■□□□□ 0.27
SYNE4-205ENST00000490730 RPL36Q9Y3U8 105 aaKnown RBP16.74■□□□□ 0.27
SYNE4-205ENST00000490730 DNAH3Q8TD57 4116 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 ALX3O95076 343 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 PF4P02776 101 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 GTF2A1P52655 376 aaPredicted RBP16.73■□□□□ 0.27
SYNE4-205ENST00000490730 RSU1Q15404 277 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 OR4X2Q8NGF9 303 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 OR51A2Q8NGJ7 313 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 OR51T1Q8NGJ9 327 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 OR13A1Q8NGR1 328 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 OR9G1Q8NH87 305 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 CNIH3Q8TBE1 160 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 LEAP2Q969E1 77 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 TOMM40LQ969M1 308 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 RPEQ96AT9 228 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 SLC29A1Q99808 456 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 TAS2R4Q9NYW5 299 aa16.73■□□□□ 0.27
SYNE4-205ENST00000490730 A0A087X0M5 115 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 TRAV24A0A0B4J272 114 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 LOC100130705A0A1B0GUX0 176 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 A0A1B0GX30 115 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 LY6LH3BQJ8 138 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 GABRPO00591 440 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 IGLL1P15814 213 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 C21orf33P30042 268 aaPredicted RBP16.72■□□□□ 0.27
SYNE4-205ENST00000490730 PIGYQ3MUY2 71 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 KLHL22Q53GT1 634 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 TCTEX1D4Q5JR98 221 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 ELP2Q6IA86 826 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 C10orf67Q8IYJ2 551 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 ZNF565Q8N9K5 539 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 PXT1Q8NFP0 134 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 MYDGFQ969H8 173 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 ZNF649Q9BS31 505 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 BARHL1Q9BZE3 327 aa16.72■□□□□ 0.27
SYNE4-205ENST00000490730 AURKAIP1Q9NWT8 199 aaPredicted RBP16.72■□□□□ 0.27
SYNE4-205ENST00000490730 AMMECR1Q9Y4X0 333 aaPredicted RBP16.72■□□□□ 0.27
SYNE4-205ENST00000490730 TSSC4Q9Y5U2 329 aaPredicted RBP16.72■□□□□ 0.27
SYNE4-205ENST00000490730 OOSP1A8MZH6 123 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 HTR3BO95264 441 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 AMY1AP04745 511 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 AMY2AP04746 511 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 FAM106CPP0CH98 169 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 C10orf99Q6UWK7 81 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 OR56B4Q8NH76 319 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 RFESDQ8TAC1 157 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 MRGPRDQ8TDS7 321 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 RGP1Q92546 391 aaPredicted RBP16.71■□□□□ 0.27
SYNE4-205ENST00000490730 JAM3Q9BX67 310 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 FAM118AQ9NWS6 357 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 IDI2-AS1Q9NZ38 188 aa16.71■□□□□ 0.27
SYNE4-205ENST00000490730 J3QR06 171 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 M0QZK8 103 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 IL1AP01583 271 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 CD2P06729 351 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 SNRNP70P08621 437 aaKnown RBP16.7■□□□□ 0.26
SYNE4-205ENST00000490730 GNG10P50151 68 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 LOXL3P58215 753 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 HES1Q14469 280 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 IL13RA2Q14627 380 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 FOXB2Q5VYV0 432 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 PLPPR1Q8TBJ4 325 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 HAVCR2Q8TDQ0 301 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 GPR148Q8TDV2 347 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 APH1BQ8WW43 257 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 PCDHB16Q9NRJ7 776 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 MOB4Q9Y3A3 225 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 HSPE1-MOB4S4R3N1 261 aa16.7■□□□□ 0.26
SYNE4-205ENST00000490730 TRAV39A0A0B4J263 110 aa16.69■□□□□ 0.26
SYNE4-205ENST00000490730 CDRT1O95170 752 aa16.69■□□□□ 0.26
SYNE4-205ENST00000490730 LIMS3P0CW19 117 aa16.69■□□□□ 0.26
SYNE4-205ENST00000490730 LIMS4P0CW20 117 aa16.69■□□□□ 0.26
SYNE4-205ENST00000490730 CGB3P0DN86 165 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms