RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CCR7P32248 378 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 PSMB2P49721 201 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 NDUFA8P51970 172 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 NCBP2P52298 156 aaKnown RBP eCLIP2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 CDKN2DP55273 166 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 TAS2R46P59540 309 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 HBG1P69891 147 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 HBG2P69892 147 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 SLC7A9P82251 487 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 FMODQ06828 376 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 PRDX1Q06830 199 aaKnown RBP2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 SKP2Q13309 424 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 ZNF235Q14590 738 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 LRRC26Q2I0M4 334 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 LRRC75BQ2VPJ9 315 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 CEACAM16Q2WEN9 425 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 ZCWPW2Q504Y3 356 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 CLEC12AQ5QGZ9 265 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 HES5Q5TA89 166 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 STEAP4Q687X5 459 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 C3orf33Q6P1S2 294 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 DHRS4L2Q6PKH6 230 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 LINC00173Q6ZV60 143 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 CLDN22Q8N7P3 220 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 COX18Q8N8Q8 333 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 GPR26Q8NDV2 337 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 GPR32P1Q8NGA4 272 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR51D1Q8NGF3 324 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR4P4Q8NGL7 312 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR2V1Q8NHB1 315 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 ASB13Q8WXK3 278 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 PPCDCQ96CD2 204 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 FAM19A4Q96LR4 140 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 BIRC8Q96P09 236 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 HOPXQ9BPY8 73 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 C6orf62Q9GZU0 229 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 LINC00597Q9H2U6 94 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 FBXL15Q9H469 300 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 XPNPEP1Q9NQW7 623 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 DMAC2Q9NW81 257 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 PCDH11XQ9BZA7 1347 aa2.88□□□□□ -1.95
HMGB1P38-201ENST00000490557 RIMS2Q9UQ26 1411 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 LRCOL1A6NCL2 159 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 KLRC4O43908 158 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 CNMDO75829 334 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 IGKV1D-16P01601 117 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 AKR1C4P17516 323 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 TCN2P20062 427 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 ADORA1P30542 326 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 RAB25P57735 213 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 PRR3P79522 188 aaKnown RBP2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 INCA1Q0VD86 236 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 EDDM3AQ14507 147 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 GINS1Q14691 196 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 HIST2H3PS2Q5TEC6 136 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 SPNS3Q6ZMD2 512 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 ZNF695Q8IW36 515 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 LRRC25Q8N386 305 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 OR10G4Q8NGN3 311 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 UBALD1Q8TB05 177 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 SLC37A2Q8TED4 501 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 EEF1AKMT1Q8WVE0 214 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 ASB17Q8WXJ9 295 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 DCPSQ96C86 337 aaKnown RBP2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 SEH1LQ96EE3 360 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 GALNT14Q96FL9 552 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 BTF3L4Q96K17 158 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 TMEM109Q9BVC6 243 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 TIPINQ9BVW5 301 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 PCBD2Q9H0N5 130 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 FAM49BQ9NUQ9 324 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 C14orf166Q9Y224 244 aaKnown RBP2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 HES2Q9Y543 173 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 SLIT3O75094 1523 aa2.87□□□□□ -1.95
HMGB1P38-201ENST00000490557 TRAV8-2A0A0B4J237 113 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 IGHV3-66A0A0C4DH42 116 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 BET1O15155 118 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 NDUFS5O43920 106 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 PLIN3O60664 434 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 FOXH1O75593 365 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 SLC25A14O95258 325 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 IFNA21P01568 189 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 CST2P09228 141 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 SPNP16150 400 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 CD36P16671 472 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 RAB3AP20336 220 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 CXCR1P25024 350 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 LGALS7P47929 136 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 CDK9P50750 372 aaKnown RBP2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 TMEM33P57088 247 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 TAS2R43P59537 309 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 SPCS3P61009 180 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 RAP1AP62834 184 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 ERCC8Q13216 396 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 PON3Q15166 354 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 LIN52Q52LA3 116 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 C1orf195Q5TG92 126 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 TMEM42Q69YG0 159 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 DGAT2L6Q6ZPD8 337 aa2.86□□□□□ -1.95
HMGB1P38-201ENST00000490557 ZNF493Q6ZR52 646 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms