RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 OR51A2Q8NGJ7 313 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 OR5D18Q8NGL1 313 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 TMEM106AQ96A25 262 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 SPSB1Q96BD6 273 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 FOXRED1Q96CU9 486 aaPredicted RBP8.44□□□□□ -1.06
TTC28-207ENST00000490475 PGLYRP3Q96LB9 341 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 CEP19Q96LK0 163 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 NKX3-1Q99801 234 aaPredicted RBP8.44□□□□□ -1.06
TTC28-207ENST00000490475 MND1Q9BWT6 205 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 CCDC90BQ9GZT6 254 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 NXF2Q9GZY0 626 aaKnown RBP8.44□□□□□ -1.06
TTC28-207ENST00000490475 HES4Q9HCC6 221 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 TAS2R4Q9NYW5 299 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 PITPNC1Q9UKF7 332 aa8.44□□□□□ -1.06
TTC28-207ENST00000490475 LSM2Q9Y333 95 aaKnown RBP8.44□□□□□ -1.06
TTC28-207ENST00000490475 ATP6V1G1O75348 118 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 ALX3O95076 343 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 CD2P06729 351 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 RAB3AP20336 220 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 DUSP1P28562 367 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 TAS2R43P59537 309 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 SPHARQ15513 63 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 MED22Q15528 200 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 KISS1Q15726 138 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 NDUFA5Q16718 116 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 Q499Y3 187 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 YIF1BQ5BJH7 314 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 FAM58AQ8N1B3 248 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 OR52N4Q8NGI2 321 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 OR14A2Q96R54 314 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 SLIRPQ9GZT3 109 aaKnown RBP8.43□□□□□ -1.06
TTC28-207ENST00000490475 ELL3Q9HB65 397 aaPredicted RBP8.43□□□□□ -1.06
TTC28-207ENST00000490475 NEK6Q9HC98 313 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 RBFOX1Q9NWB1 397 aaKnown RBP8.43□□□□□ -1.06
TTC28-207ENST00000490475 IL36RNQ9UBH0 155 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 TBL2Q9Y4P3 447 aaKnown RBP8.43□□□□□ -1.06
TTC28-207ENST00000490475 PEX16Q9Y5Y5 336 aa8.43□□□□□ -1.06
TTC28-207ENST00000490475 TRAV8-7A0A075B6U6 113 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 TRBV5-7A0A0A0MS05 114 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 A0A1W2PRD5 423 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 A0A1W2PRF3 423 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 A0A1W2PRM7 423 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 J3QRK9 145 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 UPK1BO75841 260 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 CYB5AP00167 134 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 ALDOBP05062 364 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 CD1AP06126 327 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 CHRM2P08172 466 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 HSMCR30P0CW71 290 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 TMEM225BP0DP42 221 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 EFNB2P52799 333 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 SNU13P55769 128 aaKnown RBP8.42□□□□□ -1.06
TTC28-207ENST00000490475 DEFA1P59665 94 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 DEFA3P59666 94 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 KRTAP10-3P60369 221 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 ZP1P60852 638 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 BDH1Q02338 343 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 INSL4Q14641 139 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 REC114Q7Z4M0 266 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 Q8IYB0 196 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 OR13D1Q8NGV5 346 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 MALSU1Q96EH3 234 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 ABCB10Q9NRK6 738 aa8.42□□□□□ -1.06
TTC28-207ENST00000490475 A0A075B6Q4 140 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 K7N7A8 449 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 PIN1P1O15428 100 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 GPX5O75715 221 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 KDM4BO94953 1096 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 OPN1MWP04001 364 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 TK1P04183 234 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 OPN1MW2P0DN77 364 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 OPN1MW3P0DN78 364 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 CD36P16671 472 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 PRKACAP17612 351 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 IGFBP3P17936 291 aaPredicted RBP8.41□□□□□ -1.06
TTC28-207ENST00000490475 PSMB9P28065 219 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 S100A5P33763 92 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 SOX6P35712 828 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 COL10A1Q03692 680 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 PRB3Q04118 309 aaPredicted RBP8.41□□□□□ -1.06
TTC28-207ENST00000490475 MEF2CQ06413 473 aaPredicted RBP8.41□□□□□ -1.06
TTC28-207ENST00000490475 ACSM3Q53FZ2 586 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 LIPKQ5VXJ0 399 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 TMEM200BQ69YZ2 307 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 HCP5Q6MZN7 132 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 UNQ9370/PRO34162Q6UXP9 181 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 GDPD3Q7L5L3 318 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 ZNF367Q7RTV3 350 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 OR4S1Q8NGB4 309 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 OR4M1Q8NGD0 313 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 MCFD2Q8NI22 146 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 FAM110DQ8TAY7 271 aaPredicted RBP8.41□□□□□ -1.06
TTC28-207ENST00000490475 SETD6Q8TBK2 473 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 C17orf50Q8WW18 174 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 EMG1Q92979 244 aaKnown RBP8.41□□□□□ -1.06
TTC28-207ENST00000490475 TMEM203Q969S6 136 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 AJUBAQ96IF1 538 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 DERL3Q96Q80 235 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 GPER1Q99527 375 aa8.41□□□□□ -1.06
TTC28-207ENST00000490475 CCDC32Q9BV29 185 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms