RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, human

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAIP-210	ENST00000489948	PPA2	Q9H2U2	334 aa		11.12	□□□□□ -0.63
TRAIP-210	ENST00000489948	RIMS4	Q9H426	269 aa	Predicted RBP	11.12	□□□□□ -0.63
TRAIP-210	ENST00000489948	PATZ1	Q9HBE1	687 aa	Known RBP	11.12	□□□□□ -0.63
TRAIP-210	ENST00000489948	CTSZ	Q9UBR2	303 aa		11.12	□□□□□ -0.63
TRAIP-210	ENST00000489948	ANAPC10	Q9UM13	185 aa		11.12	□□□□□ -0.63
TRAIP-210	ENST00000489948	GABARAP	H6UMI1	98 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948		H7C1Q1	480 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	TFF1	P04155	84 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	LPL	P06858	475 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	RPS2	P15880	293 aa	Known RBP	11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	DTYMK	P23919	212 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	GNG2	P59768	71 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	SSBP1	Q04837	148 aa	Known RBP	11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	SCN1B	Q07699	218 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	GRK1	Q15835	563 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	CLEC12B	Q2HXU8	276 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	SLC35E4	Q6ICL7	350 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	MOB1B	Q7L9L4	216 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	KRTAP1-3	Q8IUG1	177 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	ZNRF1	Q8ND25	227 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	OR4S1	Q8NGB4	309 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	OR8B3	Q8NGG8	313 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	GPX8	Q8TED1	209 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	NEIL1	Q96FI4	390 aa	Predicted RBP	11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	OR8B2	Q96RD0	313 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	FOXC2	Q99958	501 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	CCDC32	Q9BV29	185 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	CHST6	Q9GZX3	395 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	ETAA1	Q9NY74	926 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	AK3	Q9UIJ7	227 aa		11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	RBMX2	Q9Y388	322 aa	Known RBP	11.11	□□□□□ -0.63
TRAIP-210	ENST00000489948	CCDC168	Q8NDH2	2452 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	IGHV4-30-2	A0A087WSY4	118 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948		A0A1B0GW55	424 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	TMEM30CP	A0ZSE6	113 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	FUOM	A2VDF0	154 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948		A8MXK9	166 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	HSPB6	O14558	160 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	NDUFB3	O43676	98 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	FCN3	O75636	299 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	IGHV2-5	P01817	119 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	CD3G	P09693	182 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	DUX4L2	P0CJ85	424 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	DUX4L3	P0CJ86	424 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	DUX4L4	P0CJ87	422 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	DUX4L5	P0CJ88	424 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	DUX4L6	P0CJ89	424 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	DUX4L7	P0CJ90	424 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	SELL	P14151	372 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	PRSS3	P35030	304 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	CBX5	P45973	191 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	PPP5C	P53041	499 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	LRRC10	Q5BKY1	277 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948		Q5PR19	223 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	OLFML2A	Q68BL7	652 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	ZNF880	Q6PDB4	577 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	LYPD2	Q6UXB3	125 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	ZNF841	Q6ZN19	808 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948		Q6ZS49	121 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	ZNF554	Q86TJ5	538 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	SNX29P2	Q8IUI4	249 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	TMEM185A	Q8NFB2	350 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	PLPPR1	Q8TBJ4	325 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	NEK7	Q8TDX7	302 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	RAB39B	Q96DA2	213 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	COQ2	Q96H96	371 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	CMSS1	Q9BQ75	279 aa	Known RBP	11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	FAAP24	Q9BTP7	215 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	ZMAT3	Q9HA38	289 aa	Known RBP	11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	DUX4	Q9UBX2	424 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	LPAR3	Q9UBY5	353 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	ZNF107	Q9UII5	783 aa	Predicted RBP	11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	MRPS7	Q9Y2R9	242 aa	Known RBP	11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	DOCK11	Q5JSL3	2073 aa		11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948	ZNF469	Q96JG9	3925 aa	Predicted RBP	11.1	□□□□□ -0.63
TRAIP-210	ENST00000489948		A0A096LNT2	108 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	TRBV23-1	A0A0A0MS06	115 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	UBE2QL1	A1L167	161 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	SSX5	O60225	188 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	FCGR3A	P08637	254 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	WNT2	P09544	360 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	P2RX3	P56373	397 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	RIPPLY3	P57055	190 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	ACTB	P60709	375 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	ACTG1	P63261	375 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	MRPS15	P82914	257 aa	Known RBP	11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	ARFRP1	Q13795	201 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	BRICD5	Q6PL45	260 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	GDPD3	Q7L5L3	318 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948		Q8N402	240 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	BPIFB2	Q8N4F0	458 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	DTX3	Q8N9I9	347 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	CLDND2	Q8NHS1	167 aa		11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	MRPL30	Q8TCC3	161 aa	Known RBP	11.09	□□□□□ -0.63
TRAIP-210	ENST00000489948	NUDCD2	Q8WVJ2	157 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms