RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 MLLT11Q13015 90 aaPredicted RBP2.84□□□□□ -1.95
VPS26A-206ENST00000489794 CCL15Q16663 113 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 TBC1D28Q2M2D7 210 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 FBXL19-AS1Q494R0 122 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 PDZD11Q5EBL8 140 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 LAMTOR1Q6IAA8 161 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 C16orf47Q6ZP98 133 aaPredicted RBP2.84□□□□□ -1.95
VPS26A-206ENST00000489794 OR2Z1Q8NG97 314 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 OR4M2Q8NGB6 313 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 RNF133Q8WVZ7 376 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 ANKRD7Q92527 254 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 MRPL48Q96GC5 212 aaKnown RBP2.84□□□□□ -1.95
VPS26A-206ENST00000489794 RBP7Q96R05 134 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 MRPL20Q9BYC9 149 aaKnown RBP2.84□□□□□ -1.95
VPS26A-206ENST00000489794 ARL6Q9H0F7 186 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 FBXL15Q9H469 300 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 POMKQ9H5K3 350 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 RHOFQ9HBH0 211 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 FGFR1OP2Q9NVK5 253 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 C3orf18Q9UK00 162 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 DYSFO75923 2080 aa2.84□□□□□ -1.95
VPS26A-206ENST00000489794 SVILO95425 2214 aa2.84□□□□□ -1.96
VPS26A-206ENST00000489794 TINCRA0A1B0GVN0 87 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 SMIM23A6NLE4 172 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 F5H5K5 113 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 F5H5T6 163 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 H3BP45 60 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 CCRL2O00421 344 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 SLC16A4O15374 487 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 IGLV2-8P01709 118 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 ZNF7P17097 686 aaPredicted RBP2.83□□□□□ -1.96
VPS26A-206ENST00000489794 NTF3P20783 257 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 CDKN2CP42773 168 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 GDI2P50395 445 aaKnown RBP2.83□□□□□ -1.96
VPS26A-206ENST00000489794 GRB2P62993 217 aaKnown RBP2.83□□□□□ -1.96
VPS26A-206ENST00000489794 FADDQ13158 208 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 BTN1A1Q13410 526 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 CLEC12AQ5QGZ9 265 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 KCTD16Q68DU8 428 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 XKRXQ6PP77 449 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 SLC13A5Q86YT5 568 aaPredicted RBP2.83□□□□□ -1.96
VPS26A-206ENST00000489794 RIBC1Q8N443 379 aaPredicted RBP2.83□□□□□ -1.96
VPS26A-206ENST00000489794 LINC00337Q8N6G1 96 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 OR1P1Q8NH06 330 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 HGDQ93099 445 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 S100PBPQ96BU1 408 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 SMIM19Q96E16 107 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 KCTD7Q96MP8 289 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 TMEM208Q9BTX3 173 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 SUCNR1Q9BXA5 334 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 SLC25A31Q9H0C2 315 aa2.83□□□□□ -1.96
VPS26A-206ENST00000489794 SETD1AO15047 1707 aaKnown RBP2.82□□□□□ -1.96
VPS26A-206ENST00000489794 IGKV3D-11A0A0A0MRZ8 115 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 LOC389332A0A1B0GUA5 103 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 DAPL1A0PJW8 107 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 OR6C70A6NIJ9 312 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 TMEM210A6NLX4 147 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 CEACAM18A8MTB9 384 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 I3L4J1 428 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 UPK2O00526 184 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 ASS1P00966 412 aaKnown RBP2.82□□□□□ -1.96
VPS26A-206ENST00000489794 APOEP02649 317 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 SERPINA6P08185 405 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 SPNP16150 400 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 ATF1P18846 271 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 HOXA6P31267 233 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 SLC18A1P54219 525 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 RAB25P57735 213 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 PPP1CAP62136 330 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 BASP1P80723 227 aaKnown RBP2.82□□□□□ -1.96
VPS26A-206ENST00000489794 BCL2A1Q16548 175 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 C4orf26Q17RF5 130 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 HLA-DRB5Q30154 266 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 KLHL12Q53G59 568 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 SAPCD1Q5SSQ6 148 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 ZFAND6Q6FIF0 208 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 PRNTQ86SH4 94 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 Q8N402 240 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 ZNF680Q8NEM1 530 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 C1orf64Q8NEQ6 169 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 OR2M7Q8NG81 312 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 OR5M1Q8NGP8 315 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 CDC26Q8NHZ8 85 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 GPR82Q96P67 336 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 METTL9Q9H1A3 318 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 FAM206AQ9NX38 181 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 RBM12B-AS1Q9P1G2 102 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 KLF13Q9Y2Y9 288 aaPredicted RBP2.82□□□□□ -1.96
VPS26A-206ENST00000489794 INSIG2Q9Y5U4 225 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 SHANK1Q9Y566 2161 aa2.82□□□□□ -1.96
VPS26A-206ENST00000489794 TRAV8-2A0A0B4J237 113 aa2.81□□□□□ -1.96
VPS26A-206ENST00000489794 IGKV2-24A0A0C4DH68 120 aa2.81□□□□□ -1.96
VPS26A-206ENST00000489794 A8MWL6 223 aa2.81□□□□□ -1.96
VPS26A-206ENST00000489794 LRRN3E7EW58 273 aa2.81□□□□□ -1.96
VPS26A-206ENST00000489794 UPK1AO00322 258 aa2.81□□□□□ -1.96
VPS26A-206ENST00000489794 PHYHO14832 338 aa2.81□□□□□ -1.96
VPS26A-206ENST00000489794 TRAPPC3O43617 180 aa2.81□□□□□ -1.96
VPS26A-206ENST00000489794 LYPLA2O95372 231 aa2.81□□□□□ -1.96
VPS26A-206ENST00000489794 IFNA5P01569 189 aa2.81□□□□□ -1.96
VPS26A-206ENST00000489794 MAS1P04201 325 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 281.6 ms