RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TEX36Q5VZQ5 186 aa18.14■□□□□ 0.49
SMC4-221ENST00000489573 BTN2A1Q7KYR7 527 aa18.14■□□□□ 0.49
SMC4-221ENST00000489573 ANGPTL6Q8NI99 470 aa18.14■□□□□ 0.49
SMC4-221ENST00000489573 RAB1BQ9H0U4 201 aa18.14■□□□□ 0.49
SMC4-221ENST00000489573 Q9N2K0 584 aa18.14■□□□□ 0.49
SMC4-221ENST00000489573 METRNQ9UJH8 293 aa18.14■□□□□ 0.49
SMC4-221ENST00000489573 SCP2D1Q9UJQ7 156 aa18.14■□□□□ 0.49
SMC4-221ENST00000489573 ZNF222Q9UK12 451 aa18.14■□□□□ 0.49
SMC4-221ENST00000489573 ARFGEF3Q5TH69 2177 aa18.14■□□□□ 0.49
SMC4-221ENST00000489573 PKDREJQ9NTG1 2253 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 IGHV1-69-2A0A0G2JMI3 117 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 TMEM82A0PJX8 343 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 TMEM178BH3BS89 294 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 NDUFB6O95139 128 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 MUC1P15941 1255 aaPredicted RBP18.13■□□□□ 0.49
SMC4-221ENST00000489573 GABRA2P47869 451 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 ATXN7L3Q14CW9 347 aaPredicted RBP18.13■□□□□ 0.49
SMC4-221ENST00000489573 RBMS2Q15434 407 aaKnown RBP18.13■□□□□ 0.49
SMC4-221ENST00000489573 ZNF497Q6ZNH5 498 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 Q6ZS49 121 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 ASCC1Q8N9N2 400 aaKnown RBP18.13■□□□□ 0.49
SMC4-221ENST00000489573 CCL17Q92583 94 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 PRRT1Q99946 306 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 C20orf85Q9H1P6 137 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 SLC2A8Q9NY64 477 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 DYSFO75923 2080 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 TRAV6A0A075B6T7 132 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 POM121CA8CG34 1229 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 INMT-MINDY4F8WBC2 141 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 LGALS8O00214 317 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 ZNF205O95201 554 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 OR3A1P47881 315 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 CDK10Q15131 360 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 STUMQ69YW2 141 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 IDO2Q6ZQW0 420 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 C17orf107Q6ZR85 190 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 GAPTQ8N292 157 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 ARRDC1Q8N5I2 433 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 EHFQ9NZC4 300 aa18.13■□□□□ 0.49
SMC4-221ENST00000489573 SETXQ7Z333 2677 aaKnown RBP18.12■□□□□ 0.49
SMC4-221ENST00000489573 ZNF737O75373 536 aa18.12■□□□□ 0.49
SMC4-221ENST00000489573 SCGB2B2Q4G0G5 96 aa18.12■□□□□ 0.49
SMC4-221ENST00000489573 ZNF880Q6PDB4 577 aa18.12■□□□□ 0.49
SMC4-221ENST00000489573 DEFB108BQ8NET1 73 aa18.12■□□□□ 0.49
SMC4-221ENST00000489573 PPP1R35Q8TAP8 253 aa18.12■□□□□ 0.49
SMC4-221ENST00000489573 GINS4Q9BRT9 223 aa18.12■□□□□ 0.49
SMC4-221ENST00000489573 ING3Q9NXR8 418 aa18.12■□□□□ 0.49
SMC4-221ENST00000489573 LAMP3Q9UQV4 416 aa18.12■□□□□ 0.49
SMC4-221ENST00000489573 DOPEY1Q5JWR5 2465 aa18.12■□□□□ 0.49
SMC4-221ENST00000489573 PPIAL4EA0A075B759 164 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 TRAV38-1A0A0B4J264 116 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 TMEM30CPA0ZSE6 113 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 PPIAL4DF5H284 164 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 H2AFB2P0C5Z0 115 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 PPIAL4FP0DN26 164 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 HFEQ30201 348 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 C20orf204Q6ZNR8 217 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 MOB1BQ7L9L4 216 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 OVCH2Q7RTZ1 564 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 SNX22Q96L94 193 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 NECAP2Q9NVZ3 263 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 PPIAL4AQ9Y536 164 aa18.11■□□□□ 0.49
SMC4-221ENST00000489573 TANC2Q9HCD6 1990 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 KIR2DS1A0A191URI9 304 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 SDCBPO00560 298 aaPredicted RBP18.1■□□□□ 0.49
SMC4-221ENST00000489573 KIR2DS4P43632 304 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 TSPAN5P62079 268 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 BTG1P62324 171 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 KIR2DS1Q14954 304 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 GRK1Q15835 563 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 SLC35E4Q6ICL7 350 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 TMEM17Q86X19 198 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 NEU4Q8WWR8 484 aaPredicted RBP18.1■□□□□ 0.49
SMC4-221ENST00000489573 SDSLQ96GA7 329 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 SHARPINQ9H0F6 387 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 ABCA4P78363 2273 aa18.1■□□□□ 0.49
SMC4-221ENST00000489573 CLEC18AA5D8T8 446 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 TRDCB7Z8K6 153 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 ARPC1BO15143 372 aaKnown RBP18.09■□□□□ 0.49
SMC4-221ENST00000489573 GYPAP02724 150 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 GSTT2P0CG29 244 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 RAG2P55895 527 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 RAB25P57735 213 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 TLE4Q04727 773 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 CLEC18BQ6UXF7 455 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 ZNF561Q8N587 486 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 CLEC18CQ8NCF0 446 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 OR13C8Q8NGS7 320 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 SLC25A21Q9BQT8 299 aaPredicted RBP18.09■□□□□ 0.49
SMC4-221ENST00000489573 ZNF665Q9H7R5 613 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 ASH1LQ9NR48 2969 aaKnown RBP18.09■□□□□ 0.49
SMC4-221ENST00000489573 TRAPPC2LQ9UL33 140 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 MGAT4AQ9UM21 535 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 FLVCR2Q9UPI3 526 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 COL12A1Q99715 3063 aa18.09■□□□□ 0.49
SMC4-221ENST00000489573 NKX6-3A6NJ46 265 aa18.08■□□□□ 0.49
SMC4-221ENST00000489573 DHFRP00374 187 aa18.08■□□□□ 0.49
SMC4-221ENST00000489573 PAX5Q02548 391 aa18.08■□□□□ 0.49
SMC4-221ENST00000489573 TATDN3Q17R31 274 aa18.08■□□□□ 0.49
SMC4-221ENST00000489573 CCDC107Q8WV48 283 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms