RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 BEND2Q8NDZ0 799 aa10.89□□□□□ -0.67
CCL28-202ENST00000489442 OR5R1Q8NH85 324 aa10.89□□□□□ -0.67
CCL28-202ENST00000489442 TAF15Q92804 592 aaKnown RBP eCLIP10.89□□□□□ -0.67
CCL28-202ENST00000489442 TMEM203Q969S6 136 aa10.89□□□□□ -0.67
CCL28-202ENST00000489442 SSX3Q99909 188 aa10.89□□□□□ -0.67
CCL28-202ENST00000489442 SLITRK2Q9H156 845 aa10.89□□□□□ -0.67
CCL28-202ENST00000489442 ISYNA1Q9NPH2 558 aa10.89□□□□□ -0.67
CCL28-202ENST00000489442 TAS2R3Q9NYW6 316 aa10.89□□□□□ -0.67
CCL28-202ENST00000489442 OR6C3Q9NZP0 311 aa10.89□□□□□ -0.67
CCL28-202ENST00000489442 TRAV24A0A0B4J272 114 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 H3BUX3 64 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 GEMIN2O14893 280 aaKnown RBP10.88□□□□□ -0.67
CCL28-202ENST00000489442 GPR137BO60478 399 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 CDK2P24941 298 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 CFPP27918 469 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 MAP2K4P45985 399 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 KCNJ3P48549 501 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 RPL15P61313 204 aaKnown RBP10.88□□□□□ -0.67
CCL28-202ENST00000489442 TRAM1Q15629 374 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 HSD17B12Q53GQ0 312 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 NHLRC3Q5JS37 347 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 FAM27D1Q5T7N8 215 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 GLT8D1Q68CQ7 371 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 UNQ9370/PRO34162Q6UXP9 181 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 LINC00596Q86U02 117 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 OR4D6Q8NGJ1 314 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 OR4F5Q8NH21 305 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 NEK7Q8TDX7 302 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 C17orf50Q8WW18 174 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 CORO2AQ92828 525 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 COQ2Q96H96 371 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 UQCC2Q9BRT2 126 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 DPCDQ9BVM2 203 aaPredicted RBP10.88□□□□□ -0.67
CCL28-202ENST00000489442 TMEM133Q9H2Q1 129 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 KIF25Q9UIL4 384 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 VPREB3Q9UKI3 123 aa10.88□□□□□ -0.67
CCL28-202ENST00000489442 IGHV2-26A0A0B4J1V2 119 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 ZNF729A6NN14 1252 aaPredicted RBP10.87□□□□□ -0.67
CCL28-202ENST00000489442 CRTAPO75718 401 aaPredicted RBP10.87□□□□□ -0.67
CCL28-202ENST00000489442 SRMP19623 302 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 GLP1RP43220 463 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 MLLT11Q13015 90 aaPredicted RBP10.87□□□□□ -0.67
CCL28-202ENST00000489442 TPBGQ13641 420 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 TAF9Q16594 264 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 MPV17LQ2QL34 196 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 LRRC75BQ2VPJ9 315 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 PRAMEF5Q5TYX0 476 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 HEPN1Q6WQI6 88 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 LHFPL4Q7Z7J7 247 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 SUMF2Q8NBJ7 301 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 OR11H6Q8NGC7 330 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 NDNFQ8TB73 568 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 FOXRED1Q96CU9 486 aaPredicted RBP10.87□□□□□ -0.67
CCL28-202ENST00000489442 MRPS24Q96EL2 167 aaKnown RBP10.87□□□□□ -0.67
CCL28-202ENST00000489442 MGLLQ99685 303 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 CLEC7AQ9BXN2 247 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 MEGF9Q9H1U4 602 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 PPIL3Q9H2H8 161 aaKnown RBP10.87□□□□□ -0.67
CCL28-202ENST00000489442 BEX1Q9HBH7 125 aa10.87□□□□□ -0.67
CCL28-202ENST00000489442 RRP15Q9Y3B9 282 aaKnown RBP10.87□□□□□ -0.67
CCL28-202ENST00000489442 TBL2Q9Y4P3 447 aaKnown RBP10.87□□□□□ -0.67
CCL28-202ENST00000489442 A0A1B0GUS0 222 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 A0A1W2PP11 408 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 CPEP16870 476 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 MDKP21741 143 aaPredicted RBP10.86□□□□□ -0.67
CCL28-202ENST00000489442 PSMA1P25786 263 aaKnown RBP10.86□□□□□ -0.67
CCL28-202ENST00000489442 PAX6P26367 422 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 RAG2P55895 527 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 FAM189A2Q15884 450 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 SSX2Q16385 188 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 LY6EQ16553 131 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 PLA1AQ53H76 456 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 ZNF626Q68DY1 528 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 DHRS7BQ6IAN0 325 aaPredicted RBP10.86□□□□□ -0.67
CCL28-202ENST00000489442 BRICD5Q6PL45 260 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 ABHD12Q8N2K0 398 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 PHYHIPQ92561 330 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 MALSU1Q96EH3 234 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 SELENOIQ9C0D9 397 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 BANF2Q9H503 90 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 IFT22Q9H7X7 185 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 SPACA1Q9HBV2 294 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 ABCB10Q9NRK6 738 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 C1RLQ9NZP8 487 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 NBEAL1Q6ZS30 2694 aa10.86□□□□□ -0.67
CCL28-202ENST00000489442 KBTBD11-OT1A0A1B0GTJ5 212 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 FAM172BPA6NC97 362 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 POM121CA8CG34 1229 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 ODF3BA8MYP8 253 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 MCRIP1C9JLW8 97 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 TOR1AO14656 332 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 DENRO43583 198 aaKnown RBP10.85□□□□□ -0.67
CCL28-202ENST00000489442 MMP23AO75900 390 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 ARL6IP5O75915 188 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 MGMTP16455 207 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 NFYBP25208 207 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 RPS25P62851 125 aaKnown RBP10.85□□□□□ -0.67
CCL28-202ENST00000489442 RBM39Q14498 530 aaKnown RBP10.85□□□□□ -0.67
CCL28-202ENST00000489442 TBCEQ15813 527 aaPredicted RBP10.85□□□□□ -0.67
CCL28-202ENST00000489442 AANATQ16613 207 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms