RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TP53TG1Q9Y2A0 90 aa8.67□□□□□ -1.02
HDAC6-233ENST00000489352 A0A0U1RQV5 110 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 A0A1W2PRQ8 180 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 CYB5AP00167 134 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 LYNP07948 512 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 INAFM2P0DMQ5 153 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 ZNF91Q05481 1191 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 KLF5Q13887 457 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-233ENST00000489352 DGCR6Q14129 220 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 MMDQ15546 238 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 SOHLH1Q5JUK2 328 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 FAHD1Q6P587 224 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 SLC15A3Q8IY34 581 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 OR51E1Q8TCB6 317 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 FBLIM1Q8WUP2 373 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 MBOAT4Q96T53 435 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 DGCR6LQ9BY27 220 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 CST11Q9H112 138 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 SSU72Q9NP77 194 aaKnown RBP8.66□□□□□ -1.02
HDAC6-233ENST00000489352 MBNL3Q9NUK0 354 aaKnown RBP8.66□□□□□ -1.02
HDAC6-233ENST00000489352 IDI2-AS1Q9NZ38 188 aa8.66□□□□□ -1.02
HDAC6-233ENST00000489352 A0A1W2PPE3 182 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 ANKRD34BA5PLL1 514 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 CSN3P07498 182 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 PRKACAP17612 351 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 IL3RAP26951 378 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 C21orf33P30042 268 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-233ENST00000489352 BLVRBP30043 206 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-233ENST00000489352 GLP1RP43220 463 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 PSMA6P60900 246 aaKnown RBP8.65□□□□□ -1.02
HDAC6-233ENST00000489352 SCN1BQ07699 218 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 TMEM267Q0VDI3 215 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-233ENST00000489352 C17orf58Q2M2W7 97 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 IL34Q6ZMJ4 242 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 SLC25A26Q70HW3 274 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 FAM58AQ8N1B3 248 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 TCTEX1D1Q8N7M0 179 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 ANKRD42Q8N9B4 389 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 SLC37A3Q8NCC5 494 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 DNAAF1Q8NEP3 725 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 OR52J3Q8NH60 311 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 C11orf45Q8TAV5 145 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 DYNLRB2Q8TF09 96 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 ABHD5Q8WTS1 349 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 AMELYQ99218 206 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 CADM1Q9BY67 442 aaKnown RBP8.65□□□□□ -1.02
HDAC6-233ENST00000489352 EXOSC4Q9NPD3 245 aaKnown RBP8.65□□□□□ -1.02
HDAC6-233ENST00000489352 GPR84Q9NQS5 396 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 IL36RNQ9UBH0 155 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 PEMTQ9UBM1 199 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 FBXL7Q9UJT9 491 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 A3GALT2U3KPV4 340 aa8.65□□□□□ -1.02
HDAC6-233ENST00000489352 TRBV4-1A0A0J9YWV2 114 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 C13orf42A0A1B0GVH6 325 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 MSGN1A6NI15 193 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 RGS16O15492 202 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-233ENST00000489352 MITFO75030 526 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-233ENST00000489352 DHRS3O75911 302 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 CSTBP04080 98 aaKnown RBP8.64□□□□□ -1.03
HDAC6-233ENST00000489352 SPI1P17947 270 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 APOC4P55056 127 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 NANOS2P60321 138 aaKnown RBP8.64□□□□□ -1.03
HDAC6-233ENST00000489352 DEFB135Q30KP9 77 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 CD300EQ496F6 205 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-233ENST00000489352 SPIN3Q5JUX0 258 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 SLC16A12Q6ZSM3 486 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 Q6ZWC4 215 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 TRPM8Q7Z2W7 1104 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 RHOVQ96L33 236 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 SPACA5Q96QH8 159 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 CALYQ9NYX4 217 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 RNF150Q9ULK6 438 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 APLNQ9ULZ1 77 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 ENPP4Q9Y6X5 453 aa8.64□□□□□ -1.03
HDAC6-233ENST00000489352 TMEM269A0A1B0GVZ9 245 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 ACOD1A6NK06 481 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 EPM2AB3EWF7 344 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 ZNF736B4DX44 427 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-233ENST00000489352 SOX15O60248 233 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 OR2H2O95918 312 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 CALCBP10092 127 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 CLUP10909 449 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 ZNF44P15621 663 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 GSTT1P30711 240 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 IFNGR2P38484 337 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 ZNF146Q15072 292 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 LIN54Q6MZP7 749 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 C17orf53Q8N3J3 647 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-233ENST00000489352 OR2T12Q8NG77 320 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 RFESDQ8TAC1 157 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 RTN4IP1Q8WWV3 396 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-233ENST00000489352 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.63□□□□□ -1.03
HDAC6-233ENST00000489352 OTULINQ96BN8 352 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 RCN3Q96D15 328 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 WDR89Q96FK6 387 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-233ENST00000489352 OSBPL10Q9BXB5 764 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 SLA2Q9H6Q3 261 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 RBFOX1Q9NWB1 397 aaKnown RBP8.63□□□□□ -1.03
HDAC6-233ENST00000489352 GSTK1Q9Y2Q3 226 aa8.63□□□□□ -1.03
HDAC6-233ENST00000489352 IGHV7-81A0A0B4J1V7 117 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms