RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 OR13C5Q8NGS8 318 aa18.46■□□□□ 0.55
COL9A3-213ENST00000489045 SMIM19Q96E16 107 aa18.46■□□□□ 0.55
COL9A3-213ENST00000489045 BABAM2Q9NXR7 383 aa18.46■□□□□ 0.55
COL9A3-213ENST00000489045 CLEC2DQ9UHP7 191 aa18.46■□□□□ 0.55
COL9A3-213ENST00000489045 KIF25Q9UIL4 384 aa18.46■□□□□ 0.55
COL9A3-213ENST00000489045 LEUTXA8MZ59 168 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 OGG1O15527 345 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 FBXO24O75426 580 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 HTR3BO95264 441 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 CD24P25063 80 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 PPP3R1P63098 170 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 ADARB1P78563 741 aaKnown RBP18.45■□□□□ 0.54
COL9A3-213ENST00000489045 HLA-DRB5Q30154 266 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 UTF1Q5T230 341 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 ASCL4Q6XD76 172 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 C1QL4Q86Z23 238 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 LYG1Q8N1E2 194 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 PACRGLQ8N7B6 248 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 Q8NFD4 153 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 OR13A1Q8NGR1 328 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 ORAI1Q96D31 301 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 OR5M11Q96RB7 305 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 C8orf4Q9NR00 106 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 ZNF281Q9Y2X9 895 aa18.45■□□□□ 0.54
COL9A3-213ENST00000489045 PLXNB1O43157 2135 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 MEIKINA0A087WXM9 373 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 A0A087X0M5 115 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 KBTBD11-OT1A0A1B0GTJ5 212 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 A0A1B0GX30 115 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 TOR1AO14656 332 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 CDRT1O95170 752 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 ALDOBP05062 364 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 CD28P10747 220 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 RCN1Q15293 331 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 TMEM95Q3KNT9 176 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 DDI2Q5TDH0 399 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 DHRSXQ8N5I4 330 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 TMEM80Q96HE8 168 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 KIRREL1Q96J84 757 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 TMEM138Q9NPI0 162 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 CALYQ9NYX4 217 aa18.44■□□□□ 0.54
COL9A3-213ENST00000489045 BUB1B-PAK6H3BSN5 160 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 H3BUI4 141 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 PEX14O75381 377 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 CGB3P0DN86 165 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 CGB7P0DN87 165 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 NFYBP25208 207 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 BRS3P32247 399 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 CEACAM3P40198 252 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 VDAC2P45880 294 aaPredicted RBP18.43■□□□□ 0.54
COL9A3-213ENST00000489045 ARHGDIBP52566 201 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 PRRX1P54821 245 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 MED21Q13503 144 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 RBM39Q14498 530 aaKnown RBP18.43■□□□□ 0.54
COL9A3-213ENST00000489045 TPTE2P1Q5T6R2 138 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 OR52N1Q8NH53 320 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 PLPPR1Q8TBJ4 325 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 WIPF2Q8TF74 440 aaPredicted RBP18.43■□□□□ 0.54
COL9A3-213ENST00000489045 BARHL1Q9BZE3 327 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 WNT10AQ9GZT5 417 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 CHCHD3Q9NX63 227 aaKnown RBP18.43■□□□□ 0.54
COL9A3-213ENST00000489045 ZNF581Q9P0T4 197 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 ING4Q9UNL4 249 aa18.43■□□□□ 0.54
COL9A3-213ENST00000489045 BDKRB2P30411 391 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 ZNF93P35789 620 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-213ENST00000489045 NSUN5P1Q3KNT7 163 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 FBLN7Q53RD9 439 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 RSBN1Q5VWQ0 802 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-213ENST00000489045 DMKNQ6E0U4 476 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-213ENST00000489045 C16orf82Q7Z2V1 217 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 ZFP41Q8N8Y5 198 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 ZNF565Q8N9K5 539 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 GGHQ92820 318 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 GHSRQ92847 366 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 CREB3L1Q96BA8 519 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 METTL9Q9H1A3 318 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 NCOR1P1Q9H4R4 102 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 IL36GQ9NZH8 169 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 ST3GAL6Q9Y274 331 aa18.42■□□□□ 0.54
COL9A3-213ENST00000489045 TRBV5-5A0A0J9YX44 114 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 OPN1MWP04001 364 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 OPN1MW2P0DN77 364 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 OPN1MW3P0DN78 364 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 C21orf33P30042 268 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-213ENST00000489045 KCNJ3P48549 501 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 RBM11P57052 281 aaKnown RBP18.41■□□□□ 0.54
COL9A3-213ENST00000489045 PAX5Q02548 391 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 RIPK1Q13546 671 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 OSR2Q8N2R0 312 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 SUMF2Q8NBJ7 301 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 ZNF485Q8NCK3 441 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 OR9G1Q8NH87 305 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 MRGPRDQ8TDS7 321 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 AKR1E2Q96JD6 320 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 SLC25A33Q9BSK2 321 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 MMP28Q9H239 520 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 LIN7BQ9HAP6 207 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 IDI2-AS1Q9NZ38 188 aa18.41■□□□□ 0.54
COL9A3-213ENST00000489045 LY6LH3BQJ8 138 aa18.4■□□□□ 0.54
COL9A3-213ENST00000489045 IL1AP01583 271 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms