RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 DOCK11Q5JSL3 2073 aa13.16□□□□□ -0.3
HDAC7-224ENST00000488927 TRGV10A0A0A0MS01 117 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 HSPB6O14558 160 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 PDCD6O75340 191 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 CRLF1O75462 422 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 CA11O75493 328 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 SRP14P37108 136 aaKnown RBP13.15□□□□□ -0.3
HDAC7-224ENST00000488927 ARF6P62330 175 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 AESQ08117 197 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 ATXN7L3Q14CW9 347 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-224ENST00000488927 SLC16A12Q6ZSM3 486 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 OR56B1Q8NGI3 324 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 NEK7Q8TDX7 302 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 BCL7BQ9BQE9 202 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 SIRPDQ9H106 197 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 LPAR5Q9H1C0 372 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 METTL8Q9H825 291 aaKnown RBP13.15□□□□□ -0.3
HDAC7-224ENST00000488927 OR6C3Q9NZP0 311 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 UBE2J1Q9Y385 318 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-224ENST00000488927 PEX16Q9Y5Y5 336 aa13.15□□□□□ -0.3
HDAC7-224ENST00000488927 TEP1Q99973 2627 aaKnown RBP13.14□□□□□ -0.31
HDAC7-224ENST00000488927 NSD1Q96L73 2696 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-224ENST00000488927 TMEM272A0A1B0GTI8 110 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 ODAMA1E959 279 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 SMIM30A4D0T7 59 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 METTL21EPA6NDL7 271 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 NOL3O60936 208 aaKnown RBP13.14□□□□□ -0.31
HDAC7-224ENST00000488927 AVPP01185 164 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 RBP4P02753 201 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 CLEC2LP0C7M8 214 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 SLC2A2P11168 524 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-224ENST00000488927 MMP9P14780 707 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 RPS19P39019 145 aaKnown RBP13.14□□□□□ -0.31
HDAC7-224ENST00000488927 SERPINB10P48595 397 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 TMBIM6P55061 237 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 VBP1P61758 197 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 NCS1P62166 190 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 CTF1Q16619 201 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 SLC35E4Q6ICL7 350 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 USP43Q70EL4 1123 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 BPIFB2Q8N4F0 458 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 FAM89BQ8N5H3 189 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 ZNF565Q8N9K5 539 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 RAB2BQ8WUD1 216 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 CORO2AQ92828 525 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 ZNF714Q96N38 554 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 PCGF1Q9BSM1 259 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 GAL3ST2Q9H3Q3 398 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 KCNK15Q9H427 330 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 UNKLQ9H9P5 680 aaKnown RBP13.14□□□□□ -0.31
HDAC7-224ENST00000488927 ETV7Q9Y603 341 aa13.14□□□□□ -0.31
HDAC7-224ENST00000488927 TMEM30CPA0ZSE6 113 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 ZNF728P0DKX0 622 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 SRD5A1P18405 259 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 BLVRBP30043 206 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-224ENST00000488927 TGFBR1P36897 503 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 GLIPR1P48060 266 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 BPIFB3P59826 476 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 ZNF273Q14593 569 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 IDNKQ5T6J7 187 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 RSBN1Q5VWQ0 802 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-224ENST00000488927 NCR3LG1Q68D85 454 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 METAP1DQ6UB28 335 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-224ENST00000488927 C1orf229Q6ZS94 237 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-224ENST00000488927 TRAPPC6BQ86SZ2 158 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 CLVS1Q8IUQ0 354 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-224ENST00000488927 TPRX1Q8N7U7 411 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 SLC25A46Q96AG3 418 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 COQ2Q96H96 371 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 PLEKHJ1Q9NW61 149 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 ETAA1Q9NY74 926 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 TAS2R3Q9NYW6 316 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 ABRACLQ9P1F3 81 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 HSF4Q9ULV5 492 aa13.13□□□□□ -0.31
HDAC7-224ENST00000488927 MEIKINA0A087WXM9 373 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 SCGNO76038 276 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 PRTN3P24158 256 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 CHATP28329 748 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 NKAPLQ5M9Q1 402 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 GPR157Q5UAW9 335 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 SIGIRRQ6IA17 410 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 VMO1Q7Z5L0 202 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 PLPPR1Q8TBJ4 325 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 KCTD12Q96CX2 325 aaKnown RBP13.12□□□□□ -0.31
HDAC7-224ENST00000488927 TBX15Q96SF7 602 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 NICN1Q9BSH3 213 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 NAA50Q9GZZ1 169 aaKnown RBP13.12□□□□□ -0.31
HDAC7-224ENST00000488927 ZNF581Q9P0T4 197 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 KIF25Q9UIL4 384 aa13.12□□□□□ -0.31
HDAC7-224ENST00000488927 ANK3Q12955 4377 aaKnown RBP13.11□□□□□ -0.31
HDAC7-224ENST00000488927 ARHGAP32A7KAX9 2087 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 A0A0B4J203 849 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 ZNF729A6NN14 1252 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-224ENST00000488927 C17orf98A8MV24 154 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 FSHBP01225 129 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 FAM157CP0CG43 387 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 VEGFCP49767 419 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 ERVFRD-1P60508 538 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 GUCA2AQ02747 115 aa13.11□□□□□ -0.31
HDAC7-224ENST00000488927 ARL6IP1Q15041 203 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms