RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 NKX3-1Q99801 234 aaPredicted RBP11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 BABAM2Q9NXR7 383 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 PSORS1C1Q9UIG5 152 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 ZNF281Q9Y2X9 895 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 A6NDX4 124 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 OGG1O15527 345 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 KCNJ3P48549 501 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 TAS2R43P59537 309 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 ST3GAL4Q11206 333 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 PAN3Q58A45 887 aaKnown RBP11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 DDI2Q5TDH0 399 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 PRAMEF5Q5TYX0 476 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 XAF1Q6GPH4 301 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 AHSA2Q719I0 299 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 ABHD12Q8N2K0 398 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 KLHDC1Q8N7A1 406 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 OR51A2Q8NGJ7 313 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 OR4P4Q8NGL7 312 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 COQ2Q96H96 371 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 S100A13Q99584 98 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 CCDC90BQ9GZT6 254 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 TMEM138Q9NPI0 162 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 PAK1IP1Q9NWT1 392 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 CKLFQ9UBR5 152 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 HILPDAQ9Y5L2 63 aa11.14□□□□□ -0.63
SPTLC1-207ENST00000488921 TOR1AO14656 332 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 RGS10O43665 173 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 MMP23AO75900 390 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 CSTBP04080 98 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 CRHBPP24387 322 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 CD34P28906 385 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 BDKRB2P30411 391 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 ZNF93P35789 620 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 CEACAM3P40198 252 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 RAB13P51153 203 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 BDH1Q02338 343 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 YIF1BQ5BJH7 314 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 LDLRAD2Q5SZI1 272 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 LAIR2Q6ISS4 152 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 LINC00596Q86U02 117 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 TMEM219Q86XT9 240 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 ZNF565Q8N9K5 539 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 Q8NFD4 153 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 NR1H4Q96RI1 486 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 BARHL1Q9BZE3 327 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 PRSS22Q9GZN4 317 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 METTL9Q9H1A3 318 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 NCOR1P1Q9H4R4 102 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 PCDHB16Q9NRJ7 776 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 ING3Q9NXR8 418 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 IL36GQ9NZH8 169 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 DPM3Q9P2X0 92 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 SIGLEC9Q9Y336 463 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 MEGF8Q7Z7M0 2845 aa11.13□□□□□ -0.63
SPTLC1-207ENST00000488921 LEUTXA8MZ59 168 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 HSPB6O14558 160 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 WIPF1O43516 503 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 ZNF780AO75290 641 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 HTR3BO95264 441 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 TNFAIP8O95379 198 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 CDK1P06493 297 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 CSF1P09603 554 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 C21orf33P30042 268 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 BRS3P32247 399 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 GLP1RP43220 463 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 PRRX1P54821 245 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 PAX5Q02548 391 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 Q499Y3 187 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 ARSJQ5FYB0 599 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 NHLRC3Q5JS37 347 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 DMKNQ6E0U4 476 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 ASCL4Q6XD76 172 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 C16orf82Q7Z2V1 217 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 Q8N2B8 174 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 GHSRQ92847 366 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 AKR1E2Q96JD6 320 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 PPIL3Q9H2H8 161 aaKnown RBP11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 DUSP21Q9H596 190 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 ZNF702PQ9H963 129 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 CLEC2DQ9UHP7 191 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 ERGIC3Q9Y282 383 aa11.12□□□□□ -0.63
SPTLC1-207ENST00000488921 MEIKINA0A087WXM9 373 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 A0A087X0M5 115 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 TRBV5-5A0A0J9YX44 114 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 KBTBD11-OT1A0A1B0GTJ5 212 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 A0A1B0GX30 115 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 MYL12BO14950 172 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 MRPS14O60783 128 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 PEX14O75381 377 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 TSPAN15O95858 294 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 LALBAP00709 142 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 IGLV1-47P01700 117 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 VSIG10L2P0DP72 767 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 FSTP19883 344 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 OR3A4PP47883 348 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 GABARAPL2P60520 117 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 SLC35A2P78381 396 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 HLA-DRB5Q30154 266 aa11.11□□□□□ -0.63
SPTLC1-207ENST00000488921 PIGYQ3MUY2 71 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms