RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 FAM76BQ5HYJ3 339 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 LIAT1Q6ZQX7 453 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 NUFIP2Q7Z417 695 aaKnown RBP10.87□□□□□ -0.67
CLIC4-202ENST00000488683 TBC1D26Q86UD7 250 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 GAPTQ8N292 157 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 DMBX1Q8NFW5 382 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 SPSB4Q96A44 273 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 RGCCQ9H4X1 137 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 ZNF286AQ9HBT8 521 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 RPS10P5Q9NQ39 176 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 CCL28Q9NRJ3 127 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 IL17BQ9UHF5 180 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 PRSS50Q9UI38 385 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 RP1L1Q8IWN7 2480 aaPredicted RBP10.87□□□□□ -0.67
CLIC4-202ENST00000488683 IGKV1-6A0A0C4DH72 117 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 NUDT19A8MXV4 375 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 FAM157AC9JC47 383 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 ARG1P05089 322 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 ZNF528Q3MIS6 628 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 DHRS7BQ6IAN0 325 aaPredicted RBP10.87□□□□□ -0.67
CLIC4-202ENST00000488683 ZFP62Q8NB50 900 aaPredicted RBP10.87□□□□□ -0.67
CLIC4-202ENST00000488683 IL1F10Q8WWZ1 152 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 ZNF391Q9UJN7 358 aa10.87□□□□□ -0.67
CLIC4-202ENST00000488683 DOCK11Q5JSL3 2073 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 H7C1Q1 480 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 JTBO76095 146 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 TSPAN15O95858 294 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 GAPDHP04406 335 aaKnown RBP10.86□□□□□ -0.67
CLIC4-202ENST00000488683 ACP1P24666 158 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 LHX2P50458 406 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 TLE1Q04724 770 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 COLCA1Q6ZS62 124 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 C1orf210Q8IVY1 113 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 FAM213BQ8TBF2 198 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 C14orf79Q96F83 325 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 PRDM14Q9GZV8 571 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 ICE1Q9Y2F5 2266 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 CNOT1A5YKK6 2376 aaKnown RBP10.86□□□□□ -0.67
CLIC4-202ENST00000488683 TTC28Q96AY4 2481 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 C3orf85A0A1B0GTC6 90 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 IGSF23A1L1A6 192 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 ADAM20O43506 726 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 CD5P06127 495 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 FUT3P21217 361 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 CAMLGP49069 296 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 P4HA3Q7Z4N8 544 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 SPAG16Q8N0X2 631 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 LRTM2Q8N967 370 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 OR2M7Q8NG81 312 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 DEFB127Q9H1M4 99 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 ZNF703Q9H7S9 590 aaPredicted RBP10.86□□□□□ -0.67
CLIC4-202ENST00000488683 KMT2EQ8IZD2 1858 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 CACNA1GO43497 2377 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 SNAPINO95295 136 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 TMEM50AO95807 157 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 CLDN18P56856 261 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 RAB1AP62820 205 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 EIF5AP63241 154 aaKnown RBP10.86□□□□□ -0.67
CLIC4-202ENST00000488683 EIF5AL1Q6IS14 154 aaKnown RBP10.86□□□□□ -0.67
CLIC4-202ENST00000488683 UBAC2Q8NBM4 344 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 OR51H1Q8NH63 302 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 RSRP1Q9BUV0 290 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 SUCNR1Q9BXA5 334 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 SPACA1Q9HBV2 294 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 PARP11Q9NR21 331 aa10.86□□□□□ -0.67
CLIC4-202ENST00000488683 UBE2J1Q9Y385 318 aaPredicted RBP10.86□□□□□ -0.67
CLIC4-202ENST00000488683 A0A0G2JRQ6 117 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 E5RGE8 158 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 M0R036 132 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 MPPED1O15442 326 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 ERVS71-1P61550 626 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 OR2T2Q6IF00 324 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 FAM180AQ6UWF9 173 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 TMPRSS7Q7RTY8 843 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 LINC00518Q8N0U6 118 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 TMEM171Q8WVE6 324 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 TMEM45BQ96B21 275 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 NSG2Q9Y328 171 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 PRELID3BQ9Y3B1 194 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 MRPS18CQ9Y3D5 142 aaKnown RBP10.85□□□□□ -0.67
CLIC4-202ENST00000488683 TNRC6AQ8NDV7 1962 aaKnown RBP10.85□□□□□ -0.67
CLIC4-202ENST00000488683 A0A1W2PPE3 182 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 PQLC2LA1A4F0 135 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 CELA3BP08861 270 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 OR1C1Q15619 314 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 TMEM211Q6ICI0 200 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 MRPL21Q7Z2W9 205 aaKnown RBP10.85□□□□□ -0.67
CLIC4-202ENST00000488683 CD300LFQ8TDQ1 290 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 RBMXL1Q96E39 390 aaKnown RBP10.85□□□□□ -0.67
CLIC4-202ENST00000488683 REPIN1Q9BWE0 567 aaKnown RBP10.85□□□□□ -0.67
CLIC4-202ENST00000488683 TTTY12Q9BZ98 90 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 PLEKHA2Q9HB19 425 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 GLRX2Q9NS18 164 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 NDRG3Q9UGV2 375 aa10.85□□□□□ -0.67
CLIC4-202ENST00000488683 ADGRG4Q8IZF6 3080 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 IGKV3D-15A0A087WSY6 115 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 A6NLC8 198 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 PROB1E7EW31 1015 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 NDUFA2O43678 99 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 CA6P23280 308 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms