RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 HOXC5Q00444 222 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 SLC34A1Q06495 639 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 FMODQ06828 376 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 OR8G1Q15617 311 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 MAPK11Q15759 364 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 UAP1Q16222 522 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 SGCAQ16586 387 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 AADACL4Q5VUY2 407 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 FAM91A1Q658Y4 838 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 ZNF770Q6IQ21 691 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 C1orf94Q6P1W5 598 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 LINC00322Q6ZN03 302 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 ACP7Q6ZNF0 438 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 RBPMS2Q6ZRY4 209 aaKnown RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 ZCCHC23Q6ZST2 131 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 ANKRD46Q86W74 232 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 CDH26Q8IXH8 852 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 RIMKLAQ8IXN7 391 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 LRRC34Q8IZ02 419 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 OR9Q1Q8NGQ5 310 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 AGR3Q8TD06 166 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 C4orf3Q8WVX3 66 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 DNAJA4Q8WW22 397 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 CAPSLQ8WWF8 208 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 SLC7A6Q92536 515 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 APOBEC3DQ96AK3 386 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 NRBF2Q96F24 287 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 NOL4LQ96MY1 436 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 C18orf15Q96N68 181 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 TMEM43Q9BTV4 400 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 ADAT1Q9BUB4 502 aaKnown RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 GPN1Q9HCN4 374 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 SLCO1B3Q9NPD5 702 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 RPS6KB2Q9UBS0 482 aa3.36□□□□□ -1.87
BRCA1-217ENST00000487825 NOP16Q9Y3C1 178 aaKnown RBP3.36□□□□□ -1.87
BRCA1-217ENST00000487825 TRBV4-1A0A0J9YWV2 114 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 GMNCA6NCL1 334 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 OR6C6A6NF89 314 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 C12orf71A8MTZ7 269 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 M0QZK8 103 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 OVOL1O14753 267 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 SIGLEC5O15389 551 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 SGCEO43556 437 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 GMDSO60547 372 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 C1QCP02747 245 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 INAFM2P0DMQ5 153 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 FOLR2P14207 255 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 TAC1P20366 129 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 PRPS1L1P21108 318 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 MDH1P40925 334 aaKnown RBP3.35□□□□□ -1.87
BRCA1-217ENST00000487825 KIR3DL2P43630 455 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 SNU13P55769 128 aaKnown RBP3.35□□□□□ -1.87
BRCA1-217ENST00000487825 OR12D2P58182 307 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 SCRN3Q0VDG4 424 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 GAMTQ14353 236 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 C15orf32Q32M92 178 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 LRRC23Q53EV4 343 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-217ENST00000487825 MINOS1Q5TGZ0 78 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 ULK3Q6PHR2 472 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 HDDC2Q7Z4H3 204 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 DHDDSQ86SQ9 333 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 SLC25A42Q86VD7 318 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 RANBP3LQ86VV4 465 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-217ENST00000487825 SLC22A9Q8IVM8 553 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 KRTCAP2Q8N6L1 136 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 OR11H1Q8NG94 326 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 OR11H6Q8NGC7 330 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 OR4A15Q8NGL6 344 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 ACTRT1Q8TDG2 376 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 TCP10LQ8TDR4 215 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 LRRC29Q8WV35 223 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 TOMM40LQ969M1 308 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 SEH1LQ96EE3 360 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 GAFA1Q96PS6 74 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 OVOL2Q9BRP0 275 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 ERP44Q9BS26 406 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 HCAR1Q9BXC0 346 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 SLC22A4Q9H015 551 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 TUBB1Q9H4B7 451 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 RIBC2Q9H4K1 309 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 WDR76Q9H967 626 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 RNPEPL1Q9HAU8 725 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 ELL3Q9HB65 397 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-217ENST00000487825 C19orf12Q9NSK7 152 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 SIGLEC8Q9NYZ4 499 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 P2RX2Q9UBL9 471 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 MARCOQ9UEW3 520 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-217ENST00000487825 MINOS1-NBL1R4GNA1 71 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 VPS13BQ7Z7G8 4022 aa3.35□□□□□ -1.87
BRCA1-217ENST00000487825 A0A0B4J2E0 115 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 TRBV5-5A0A0J9YX44 114 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 A0A1B0GX12 115 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 A0A1W2PPQ1 181 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 C16orf90A8MZG2 172 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 SLC33A1O00400 549 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-217ENST00000487825 IGF1P05019 195 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 GSTA1P08263 222 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 KRTAP1-4P0C5Y4 121 aa3.34□□□□□ -1.87
BRCA1-217ENST00000487825 NR2C1P13056 603 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms