RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 PTPRJQ12913 1337 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 TSC2P49815 1807 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 PATJQ8NI35 1801 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 SHANK1Q9Y566 2161 aa2.05□□□□□ -2.08
TTC3-220ENST00000487711 ANKRD65E5RJM6 399 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 H0YJX3 145 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 I3L4J1 428 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 K7EM74 188 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 K7EN84 100 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 CACNA1AO00555 2505 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 ITGB1BP1O14713 200 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 PLXNB2O15031 1838 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 KLHL2O95198 593 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 SBF1O95248 1867 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 SHBGP04278 402 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 S100A6P06703 90 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 RHOCP08134 193 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 SERPINA6P08185 405 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 SNRPAP09012 282 aaKnown RBP2.04□□□□□ -2.08
TTC3-220ENST00000487711 PGA4P0DJD7 388 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 PGA3P0DJD8 388 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 KDELR1P24390 212 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 TEAD1P28347 426 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 GNRHRP30968 328 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 MAGEA12P43365 314 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 CXCL12P48061 93 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 HCAR3P49019 387 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 UBE2E1P51965 193 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 OR2B8PP59922 312 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 PRR3P79522 188 aaKnown RBP2.04□□□□□ -2.08
TTC3-220ENST00000487711 RPL18AQ02543 176 aaKnown RBP2.04□□□□□ -2.08
TTC3-220ENST00000487711 TAL2Q16559 108 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 NDUFAF6Q330K2 333 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 CCDC153Q494R4 210 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 GCSAMLQ5JQS6 135 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 CPTPQ5TA50 214 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 HHATQ5VTY9 493 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 STEAP4Q687X5 459 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 ZFP1Q6P2D0 407 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 WDR31Q8NA23 367 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 OR10W1Q8NGF6 305 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 OR52E2Q8NGJ4 325 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 OR51A7Q8NH64 312 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 ACTL9Q8TC94 416 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 PIFOQ8TCI5 191 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 C10orf82Q8WW14 230 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 POP5Q969H6 163 aaKnown RBP2.04□□□□□ -2.08
TTC3-220ENST00000487711 CCDC127Q96BQ5 260 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 GALNT14Q96FL9 552 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 ZNF514Q96K75 400 aaPredicted RBP2.04□□□□□ -2.08
TTC3-220ENST00000487711 UBE2E2Q96LR5 201 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 SERPINB11Q96P15 392 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 SCGB3A2Q96PL1 93 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 QKIQ96PU8 341 aaKnown RBP eCLIP2.04□□□□□ -2.08
TTC3-220ENST00000487711 UTP23Q9BRU9 249 aaKnown RBP2.04□□□□□ -2.08
TTC3-220ENST00000487711 TRABDQ9H4I3 376 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 REEP1Q9H902 201 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 MRPL40Q9NQ50 206 aaKnown RBP2.04□□□□□ -2.08
TTC3-220ENST00000487711 C8orf4Q9NR00 106 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 UBAP1Q9NZ09 502 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 VAPAQ9P0L0 249 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 CYB5R1Q9UHQ9 305 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 SCML1Q9UN30 329 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 ACOT9Q9Y305 439 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 URGCP-MRPS24S4R325 110 aa2.04□□□□□ -2.08
TTC3-220ENST00000487711 TRIP11Q15643 1979 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 CASP8AP2Q9UKL3 1982 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 VWA8A3KMH1 1905 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 MGAMO43451 1857 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 A0A1B0GTI1 187 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 SMIM31A0A1B0GVY4 71 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 FAM159BA6NKW6 160 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 A8MUU9 505 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 TMEM114B3SHH9 223 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 CLDN34H7C241 214 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 GOLGA8RI6L899 631 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 PLPP3O14495 311 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 COPEO14579 308 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 TOR1AO14656 332 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 CST8O60676 142 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 APOEP02649 317 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 C1QAP02745 245 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 GP1BAP07359 652 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 OR8U9P0C7N5 309 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 SLC35E2BP0CK96 405 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 PGA5P0DJD9 388 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 KCNE1P15382 129 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 SDC4P31431 198 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 PFN2P35080 140 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 RPL22P35268 128 aaKnown RBP2.03□□□□□ -2.08
TTC3-220ENST00000487711 HSPA13P48723 471 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 HCCSP53701 268 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 RPL31P62899 125 aaKnown RBP2.03□□□□□ -2.08
TTC3-220ENST00000487711 SKP1P63208 163 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 KDSRQ06136 332 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 LAMTOR4Q0VGL1 99 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 DYNC1I2Q13409 638 aaKnown RBP2.03□□□□□ -2.08
TTC3-220ENST00000487711 TMED2Q15363 201 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 ACTL10Q5JWF8 245 aa2.03□□□□□ -2.08
TTC3-220ENST00000487711 SPANXN3Q5MJ09 141 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms