RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 TGFBR3Q03167 851 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 ACVR1Q04771 509 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 PRKCDQ05655 676 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 CD47Q08722 323 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 C2orf54Q08AI8 447 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 STX4Q12846 297 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 BNIP2Q12982 314 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 MADCAM1Q13477 382 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 ASAH1Q13510 395 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 RAB31Q13636 194 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 ZNF235Q14590 738 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 ATP6AP1Q15904 470 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 SNCBQ16143 134 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 DEFB113Q30KQ7 82 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 TTMPQ5BVD1 217 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 PDZD11Q5EBL8 140 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 PAGE3Q5JUK9 113 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 OGFRL1Q5TC84 451 aaPredicted RBP2.46□□□□□ -2.02
UBR3-211ENST00000487689 THOC7Q6I9Y2 204 aaKnown RBP2.46□□□□□ -2.02
UBR3-211ENST00000487689 FAM45BPQ6NSW5 357 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 NIPAL1Q6NVV3 410 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 ZNF544Q6NX49 715 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 CNIH2Q6PI25 160 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 DRAM2Q6UX65 266 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 NPSR1Q6W5P4 371 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 PRSS41Q7RTY9 318 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 CADM2Q8N3J6 435 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 C14orf178Q8N769 122 aaPredicted RBP2.46□□□□□ -2.02
UBR3-211ENST00000487689 HSD17B11Q8NBQ5 300 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 OR5L1Q8NGL2 311 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 OR51E1Q8TCB6 317 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 FAM45AQ8TCE6 357 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 RNASEH2CQ8TDP1 164 aaKnown RBP2.46□□□□□ -2.02
UBR3-211ENST00000487689 RNF138Q8WVD3 245 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 CHCHD10Q8WYQ3 142 aaPredicted RBP2.46□□□□□ -2.02
UBR3-211ENST00000487689 WDR34Q96EX3 536 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 P2RX4Q99571 388 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 APOL4Q9BPW4 351 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 SELENOSQ9BQE4 189 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 C20orf85Q9H1P6 137 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 DHX35Q9H5Z1 703 aaKnown RBP2.46□□□□□ -2.02
UBR3-211ENST00000487689 ZNF442Q9H7R0 627 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 ACOT13Q9NPJ3 140 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 TREM2Q9NZC2 230 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 SNX24Q9Y343 169 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 TBL2Q9Y4P3 447 aaKnown RBP2.46□□□□□ -2.02
UBR3-211ENST00000487689 KLF12Q9Y4X4 402 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 UBIAD1Q9Y5Z9 338 aa2.46□□□□□ -2.02
UBR3-211ENST00000487689 A0A0G2JLM5 398 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 RBMY1BA6NDE4 496 aaKnown RBP2.45□□□□□ -2.02
UBR3-211ENST00000487689 RBMY1EA6NEQ0 496 aaKnown RBP2.45□□□□□ -2.02
UBR3-211ENST00000487689 A6NIZ1 184 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 ZNF233A6NK53 670 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 ZNF726A6NNF4 738 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 C9J4A7 227 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 C12orf77C9JDV5 145 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 M0R1B8 84 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 GABRPO00591 440 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 CDIPTO14735 213 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 AGPAT2O15120 278 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 FABP7O15540 132 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 ATP8B1O43520 1251 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 ENSAO43768 121 aaKnown RBP2.45□□□□□ -2.02
UBR3-211ENST00000487689 RAD1O60671 282 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 HPGDSO60760 199 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 TTC4O95801 387 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 IFNA6P05013 189 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 RBMY1DP0C7P1 496 aaKnown RBP2.45□□□□□ -2.02
UBR3-211ENST00000487689 RBMY1A1P0DJD3 496 aaKnown RBP2.45□□□□□ -2.02
UBR3-211ENST00000487689 LAMP1P11279 417 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 ZNF35P13682 527 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 NQO1P15559 274 aaKnown RBP2.45□□□□□ -2.02
UBR3-211ENST00000487689 HMGA1P17096 107 aaKnown RBP2.45□□□□□ -2.02
UBR3-211ENST00000487689 ZNF7P17097 686 aaPredicted RBP2.45□□□□□ -2.02
UBR3-211ENST00000487689 USF1P22415 310 aaPredicted RBP2.45□□□□□ -2.02
UBR3-211ENST00000487689 F8A1P23610 371 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 HTR1DP28221 377 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 PFN2P35080 140 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 PPP1R2P41236 205 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 HCAR3P49019 387 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 RAB7AP51149 207 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 STC1P52823 247 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 NKX2-5P52952 324 aaPredicted RBP2.45□□□□□ -2.02
UBR3-211ENST00000487689 ACTBP60709 375 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 RAB8AP61006 207 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 RAP1BP61224 184 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 ACTG1P63261 375 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 GLO1Q04760 184 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 CD164Q04900 197 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 MXD1Q05195 221 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 PDIA2Q13087 525 aaKnown RBP2.45□□□□□ -2.02
UBR3-211ENST00000487689 QPRTQ15274 297 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 GUSBP1Q15486 140 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 LRRC36Q1X8D7 754 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 CLVS2Q5SYC1 327 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 CCNJQ5T5M9 372 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 FAM27D1Q5T7N8 215 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 C1orf146Q5VVC0 180 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 HBMQ6B0K9 141 aa2.45□□□□□ -2.02
UBR3-211ENST00000487689 PPP1R2P3Q6NXS1 205 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms