RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 C10orf35Q96D05 121 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 CNN2Q99439 309 aaKnown RBP4.41□□□□□ -1.7
MACF1-221ENST00000487656 NEU1Q99519 415 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 GON7Q9BXV9 100 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 CADM1Q9BY67 442 aaKnown RBP4.41□□□□□ -1.7
MACF1-221ENST00000487656 PRRG3Q9BZD7 231 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 CHST6Q9GZX3 395 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 PCDHB16Q9NRJ7 776 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 KRT84Q9NSB2 600 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 TAS2R3Q9NYW6 316 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 HHLA2Q9UM44 414 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 ARL2BPQ9Y2Y0 163 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 MOB4Q9Y3A3 225 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 R4GMQ9 66 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 HSPE1-MOB4S4R3N1 261 aa4.41□□□□□ -1.7
MACF1-221ENST00000487656 A0A087WWL8 130 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 TRBV2A0A0J9YWF9 115 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 SERPINE3A8MV23 424 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 MMP23AO75900 390 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 RPP14O95059 124 aaKnown RBP4.4□□□□□ -1.71
MACF1-221ENST00000487656 IGLV1-47P01700 117 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 KRT8P05787 483 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 OCM2P0CE71 109 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 OCMP0CE72 109 aaPredicted RBP4.4□□□□□ -1.71
MACF1-221ENST00000487656 PRKACAP17612 351 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 CCL1P22362 96 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 PRKACGP22612 351 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 PRKACBP22694 351 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 DUSP1P28562 367 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 CD34P28906 385 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 OR3A4PP47883 348 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 CRISP1P54107 249 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 MTCP1P56278 107 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 P2RX3P56373 397 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 MS4A2Q01362 244 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 ZNF91Q05481 1191 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 HES1Q14469 280 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 RBM39Q14498 530 aaKnown RBP4.4□□□□□ -1.71
MACF1-221ENST00000487656 ZNF146Q15072 292 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 ODF4Q2M2E3 257 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 HLA-DRB5Q30154 266 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 SPIN3Q5JUX0 258 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 FAM209BQ5JX69 171 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 TPTE2P1Q5T6R2 138 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 C9orf66Q5T8R8 295 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 PRAMEF5Q5TYX0 476 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 TCF23Q7RTU1 214 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 OR2W3Q7Z3T1 314 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 ZNF695Q8IW36 515 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 FOXRED2Q8IWF2 684 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 SLC35F2Q8IXU6 374 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 YIPF7Q8N8F6 280 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 ZNF565Q8N9K5 539 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 KLHL30-AS1Q8NEE0 82 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 DNAAF1Q8NEP3 725 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 OR9G1Q8NH87 305 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 DNAJC9Q8WXX5 260 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 PP6455Q8WZ26 134 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 RPEQ96AT9 228 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 ASB9Q96DX5 294 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 NSL1Q96IY1 281 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 C8orf49Q96NF6 230 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 P2RX4Q99571 388 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 TTTY10Q9BZA0 68 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 SLC25A19Q9HC21 320 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 EXOSC4Q9NPD3 245 aaKnown RBP4.4□□□□□ -1.71
MACF1-221ENST00000487656 CLN6Q9NWW5 311 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 COPS3Q9UNS2 423 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 AMMECR1Q9Y4X0 333 aaPredicted RBP4.4□□□□□ -1.71
MACF1-221ENST00000487656 KMT2CQ8NEZ4 4911 aaKnown RBP4.4□□□□□ -1.71
MACF1-221ENST00000487656 SORL1Q92673 2214 aa4.4□□□□□ -1.71
MACF1-221ENST00000487656 IGKV1-27A0A075B6S5 117 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 A0A087X0M5 115 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 A0A1B0GX30 115 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 FAM172BPA6NC97 362 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 FAM90A18PA6NE21 464 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 FAM90A16PA6NEW6 464 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 CCDC182A6NF36 153 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 FAM90A20PA6NIJ5 464 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 METTL15A6NJ78 407 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 SH2D7A6NKC9 451 aaPredicted RBP4.39□□□□□ -1.71
MACF1-221ENST00000487656 AQP12BA6NM10 295 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 ZNF729A6NN14 1252 aaPredicted RBP4.39□□□□□ -1.71
MACF1-221ENST00000487656 FAM90A9PA6NNJ1 464 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 FAM90A12PA8MX19 464 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 FAM90A5PA8MXJ8 464 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 PRR32B1ATL7 298 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 H0YHG0 523 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 LY6LH3BQJ8 138 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 CCL24O00175 119 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 SIRPB1O00241 398 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 MAGEB4O15481 346 aaPredicted RBP4.39□□□□□ -1.71
MACF1-221ENST00000487656 FGF16O43320 207 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 ENTPD6O75354 484 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 SULT1C4O75897 302 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 OR2H2O95918 312 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 SNRNP70P08621 437 aaKnown RBP4.39□□□□□ -1.71
MACF1-221ENST00000487656 OR2T7P0C7T2 308 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 FAM90A15PP0C7V4 464 aa4.39□□□□□ -1.71
MACF1-221ENST00000487656 FAM90A13PP0C7W8 464 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms