RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 EPHA2P29317 976 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 MTCP1P56278 107 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 ACTR3P61158 418 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 MADCAM1Q13477 382 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 GPR50Q13585 617 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 KIAA0141Q14154 515 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-228ENST00000487354 PTGES3Q15185 160 aaKnown RBP11.96□□□□□ -0.49
MCF2L-228ENST00000487354 CXorf66Q5JRM2 361 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-228ENST00000487354 NXNL2Q5VZ03 156 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 ZFAND6Q6FIF0 208 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 TGIF2LXQ8IUE1 241 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 IZUMO1Q8IYV9 350 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 ARHGAP24Q8N264 748 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 CCDC54Q8NEL0 328 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 PP6455Q8WZ26 134 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 C10orf35Q96D05 121 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 ASB9Q96DX5 294 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 EAF1Q96JC9 268 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-228ENST00000487354 CITED4Q96RK1 184 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 TBX5Q99593 518 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 HSPB9Q9BQS6 159 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 OSBPL10Q9BXB5 764 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 PLSCR3Q9NRY6 295 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 CALYQ9NYX4 217 aa11.96□□□□□ -0.49
MCF2L-228ENST00000487354 ALMS1Q8TCU4 4167 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 NPIPB11E5RHQ5 1161 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 IL1AP01583 271 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 IGHG4P01861 327 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 KRT8P05787 483 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 ELANEP08246 267 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 HCKP08631 526 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 ZNF44P15621 663 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 PSMB8P28062 276 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 GLP1RP43220 463 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 RAB7AP51149 207 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 ZNF816Q0VGE8 651 aaPredicted RBP11.95□□□□□ -0.5
MCF2L-228ENST00000487354 FAHD1Q6P587 224 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 LHFPL2Q6ZUX7 228 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 UTS2BQ765I0 119 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 OR51T1Q8NGJ9 327 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 OR5D18Q8NGL1 313 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 OPALINQ96PE5 141 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 SPACA5Q96QH8 159 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 EDA2RQ9HAV5 297 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 LIN7CQ9NUP9 197 aaKnown RBP11.95□□□□□ -0.5
MCF2L-228ENST00000487354 IDI2-AS1Q9NZ38 188 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 OR6C3Q9NZP0 311 aa11.95□□□□□ -0.5
MCF2L-228ENST00000487354 IGHV3-72A0A0B4J1Y9 119 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 IGHV1-3A0A0C4DH29 117 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 A0A1W2PPE3 182 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 METTL15A6NJ78 407 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 B2RBV5 119 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 HSD17B6O14756 317 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 APOL3O95236 402 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 CYB5AP00167 134 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 SERPINA3P01011 423 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 GNG10P50151 68 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 DAPP51397 102 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 SCN1BQ07699 218 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 C12orf73Q69YU5 71 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 ADAMTSL5Q6ZMM2 481 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 TCEANCQ8N8B7 351 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 CHST4Q8NCG5 386 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 TMEM104Q8NE00 496 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 OR11H1Q8NG94 326 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 TMEM163Q8TC26 289 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 CCDC124Q96CT7 223 aaKnown RBP11.94□□□□□ -0.5
MCF2L-228ENST00000487354 TEX12Q9BXU0 123 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 GNB4Q9HAV0 340 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 KIF25Q9UIL4 384 aa11.94□□□□□ -0.5
MCF2L-228ENST00000487354 TRAV24A0A0B4J272 114 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 GNGT2O14610 69 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 LY86O95711 162 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 UBCP0CG48 685 aaKnown RBP11.93□□□□□ -0.5
MCF2L-228ENST00000487354 SSTR5P35346 364 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 REG1BP48304 166 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 ZP1P60852 638 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 DOC2BQ14184 412 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 RSBN1Q5VWQ0 802 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-228ENST00000487354 FAM53AQ6NSI3 398 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-228ENST00000487354 OR10AC1Q8NH08 325 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 PLPPR1Q8TBJ4 325 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 SPSB1Q96BD6 273 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 HRASLS5Q96KN8 279 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 MBOAT4Q96T53 435 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 TM2D3Q9BRN9 247 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 NCOR1P1Q9H4R4 102 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 PALMDQ9NP74 551 aa11.93□□□□□ -0.5
MCF2L-228ENST00000487354 SIRT4Q9Y6E7 314 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-228ENST00000487354 ZAR1LA6NP61 321 aa11.92□□□□□ -0.5
MCF2L-228ENST00000487354 I3L521 148 aa11.92□□□□□ -0.5
MCF2L-228ENST00000487354 HSPB6O14558 160 aa11.92□□□□□ -0.5
MCF2L-228ENST00000487354 MITFO75030 526 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-228ENST00000487354 SULT1C4O75897 302 aa11.92□□□□□ -0.5
MCF2L-228ENST00000487354 PRKACBP22694 351 aa11.92□□□□□ -0.5
MCF2L-228ENST00000487354 HTR1FP30939 366 aa11.92□□□□□ -0.5
MCF2L-228ENST00000487354 INSL3P51460 131 aa11.92□□□□□ -0.5
MCF2L-228ENST00000487354 GNB1P62873 340 aa11.92□□□□□ -0.5
MCF2L-228ENST00000487354 PAX5Q02548 391 aa11.92□□□□□ -0.5
MCF2L-228ENST00000487354 ZNF85Q03923 595 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms