RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TRDCB7Z8K6 153 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 OR8U9P0C7N5 309 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 CCL2P13500 99 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 BCL3P20749 454 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 LMO1P25800 156 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 HAAOP46952 286 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 ZNF766Q5HY98 468 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 OR8U1Q8NH10 309 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 HPSE2Q8WWQ2 592 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 WDYHV1Q96HA8 205 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 TP53RKQ96S44 253 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 TMEM222Q9H0R3 208 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 Q9N2K0 584 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 LUZP4Q9P127 313 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 RCL1Q9Y2P8 373 aaKnown RBP22.37■■□□□ 1.17
HLA-C-208ENST00000487245 ZNF732B4DXR9 585 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 C9JQL5 133 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 GPM6AP51674 278 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 TRIP6Q15654 476 aaKnown RBP22.37■■□□□ 1.17
HLA-C-208ENST00000487245 C3AR1Q16581 482 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 SLC35G3Q8N808 338 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 OR1K1Q8NGR3 316 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 SLAMF9Q96A28 289 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 ZNF175Q9Y473 711 aa22.37■■□□□ 1.17
HLA-C-208ENST00000487245 AHCTF1Q8WYP5 2266 aa22.36■■□□□ 1.17
HLA-C-208ENST00000487245 CD300LBA8K4G0 201 aa22.36■■□□□ 1.17
HLA-C-208ENST00000487245 TRAPPC2LH3BP13 241 aa22.36■■□□□ 1.17
HLA-C-208ENST00000487245 SNCAP37840 140 aa22.36■■□□□ 1.17
HLA-C-208ENST00000487245 ARG2P78540 354 aa22.36■■□□□ 1.17
HLA-C-208ENST00000487245 PDCD1Q15116 288 aa22.36■■□□□ 1.17
HLA-C-208ENST00000487245 SCRT1Q9BWW7 348 aa22.36■■□□□ 1.17
HLA-C-208ENST00000487245 FGF23Q9GZV9 251 aaPredicted RBP22.36■■□□□ 1.17
HLA-C-208ENST00000487245 DEFB127Q9H1M4 99 aa22.36■■□□□ 1.17
HLA-C-208ENST00000487245 PLK3Q9H4B4 646 aa22.36■■□□□ 1.17
HLA-C-208ENST00000487245 MPC1Q9Y5U8 109 aa22.36■■□□□ 1.17
HLA-C-208ENST00000487245 LIPGQ9Y5X9 500 aa22.36■■□□□ 1.17
HLA-C-208ENST00000487245 DUXBA0A1W2PPF3 345 aa22.35■■□□□ 1.17
HLA-C-208ENST00000487245 TSPAN15O95858 294 aa22.35■■□□□ 1.17
HLA-C-208ENST00000487245 FBXW9Q5XUX1 488 aa22.35■■□□□ 1.17
HLA-C-208ENST00000487245 LINC00596Q86U02 117 aa22.35■■□□□ 1.17
HLA-C-208ENST00000487245 LINC00518Q8N0U6 118 aa22.35■■□□□ 1.17
HLA-C-208ENST00000487245 BCL2L2Q92843 193 aaPredicted RBP22.35■■□□□ 1.17
HLA-C-208ENST00000487245 PRSS50Q9UI38 385 aa22.35■■□□□ 1.17
HLA-C-208ENST00000487245 ARGFXA6NJG6 315 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 ANKRD30BLA7E2S9 258 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 GNRHRP30968 328 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 ID4P47928 161 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 CLN3Q13286 438 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 GNMTQ14749 295 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 IGSF11Q5DX21 431 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 GTF3AQ92664 365 aaKnown RBP22.34■■□□□ 1.17
HLA-C-208ENST00000487245 SPIN2AQ99865 258 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 SPIN2BQ9BPZ2 258 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 CACFD1Q9UGQ2 172 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 SLC22A20A6NK97 555 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 NGFP01138 241 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 PEA15Q15121 130 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 BOD1Q96IK1 185 aa22.34■■□□□ 1.17
HLA-C-208ENST00000487245 OR5B21A6NL26 309 aa22.33■■□□□ 1.17
HLA-C-208ENST00000487245 AGPAT2O15120 278 aa22.33■■□□□ 1.17
HLA-C-208ENST00000487245 TUSC2O75896 110 aa22.33■■□□□ 1.17
HLA-C-208ENST00000487245 CTXN2P0C2S0 81 aa22.33■■□□□ 1.17
HLA-C-208ENST00000487245 TGIF1Q15583 401 aa22.33■■□□□ 1.17
HLA-C-208ENST00000487245 OR5P3Q8WZ94 311 aa22.33■■□□□ 1.17
HLA-C-208ENST00000487245 USB1Q9BQ65 265 aaKnown RBP22.33■■□□□ 1.17
HLA-C-208ENST00000487245 ZDHHC11Q9H8X9 412 aa22.33■■□□□ 1.17
HLA-C-208ENST00000487245 SPACA1Q9HBV2 294 aa22.33■■□□□ 1.17
HLA-C-208ENST00000487245 FREM1Q5H8C1 2179 aa22.33■■□□□ 1.16
HLA-C-208ENST00000487245 CLEC18AA5D8T8 446 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 TK1P04183 234 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 NFYBP25208 207 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 MIDNQ504T8 468 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 CLEC18CQ8NCF0 446 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 RIMS4Q9H426 269 aaPredicted RBP22.32■■□□□ 1.16
HLA-C-208ENST00000487245 SAV1Q9H4B6 383 aaPredicted RBP22.32■■□□□ 1.16
HLA-C-208ENST00000487245 SMCO4Q9NRQ5 59 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 C19orf12Q9NSK7 152 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 MED13Q9UHV7 2174 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 KIR2DS1A0A191URI9 304 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 IL18BPO95998 194 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 FOLR2P14207 255 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 KIR2DS4P43632 304 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 HOXA1P49639 335 aaPredicted RBP22.32■■□□□ 1.16
HLA-C-208ENST00000487245 RAB13P51153 203 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 KIR2DS1Q14954 304 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 AVPI1Q5T686 147 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 CLEC9AQ6UXN8 241 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 ZNF573Q86YE8 665 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 C12orf49Q9H741 205 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 MTCH1Q9NZJ7 389 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 CRIM1Q9NZV1 1036 aa22.32■■□□□ 1.16
HLA-C-208ENST00000487245 A0A1B0GW64 132 aa22.31■■□□□ 1.16
HLA-C-208ENST00000487245 NKX2-6A6NCS4 301 aa22.31■■□□□ 1.16
HLA-C-208ENST00000487245 J3QW42 95 aa22.31■■□□□ 1.16
HLA-C-208ENST00000487245 CAMLGP49069 296 aa22.31■■□□□ 1.16
HLA-C-208ENST00000487245 EWSR1Q01844 656 aaKnown RBP eCLIP22.31■■□□□ 1.16
HLA-C-208ENST00000487245 TBC1D26Q86UD7 250 aa22.31■■□□□ 1.16
HLA-C-208ENST00000487245 SELENOHQ8IZQ5 122 aaKnown RBP22.31■■□□□ 1.16
HLA-C-208ENST00000487245 SPRR3Q9UBC9 169 aa22.31■■□□□ 1.16
HLA-C-208ENST00000487245 TRBV6-6A0A0A6YYG2 114 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms