RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 NIPAL2Q9H841 368 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 SIGLEC7Q9Y286 467 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 HCFC1P51610 2035 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 AKAP13Q12802 2813 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 EML6Q6ZMW3 1958 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 MED13Q9UHV7 2174 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 TRAV36DV7A0A075B6V5 113 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 IGHV1OR15-1A0A075B7D0 117 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 IGKV1D-8A0A087WSZ0 117 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 A0A0G2JRQ6 117 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 TMEM72A0PK05 275 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 SMCO3A2RU48 225 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 EFCAB9A8MZ26 197 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 LRRN3E7EW58 273 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 H3BN98 237 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 WRBO00258 174 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 KPNA4O00629 521 aaPredicted RBP3□□□□□ -1.93
PTCD3-216ENST00000487043 CDC42EP2O14613 210 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 BCKDKO14874 412 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 OR2T1O43869 369 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 MPZL2O60487 215 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 OR7A10O76100 309 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 NDUFB2O95178 105 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 AHSA1O95433 338 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 HMGN1P05114 100 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 HPNP05981 417 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 TSPAN19P0C672 248 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 ASAH2BP0C7U1 165 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 GATA1P15976 413 aaPredicted RBP3□□□□□ -1.93
PTCD3-216ENST00000487043 ABOP16442 354 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 GATA2P23769 480 aaPredicted RBP3□□□□□ -1.93
PTCD3-216ENST00000487043 GPR4P46093 362 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 RPS5P46782 204 aaKnown RBP3□□□□□ -1.93
PTCD3-216ENST00000487043 DNASE1L1P49184 302 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 GPM6AP51674 278 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 NUP107P57740 925 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 FXYD6P3P58550 94 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 PRPS1P60891 318 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 CDC42P60953 191 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 SNRPGP62308 76 aaKnown RBP3□□□□□ -1.93
PTCD3-216ENST00000487043 ARG2P78540 354 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 IL5RAQ01344 420 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 FOXF1Q12946 379 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 MAD2L1BPQ15013 274 aaPredicted RBP3□□□□□ -1.93
PTCD3-216ENST00000487043 DEFB109BQ30KR1 87 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 C15orf32Q32M92 178 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 PLPPR5Q32ZL2 321 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 ALKBH6Q3KRA9 238 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 ZBED5Q49AG3 693 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 TCTEX1D4Q5JR98 221 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 RBM48Q5RL73 367 aaKnown RBP3□□□□□ -1.93
PTCD3-216ENST00000487043 SLC25A30Q5SVS4 291 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 C1orf140Q5VVS0 124 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 TMEM236Q5W0B7 351 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 C12orf73Q69YU5 71 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 SMARCD3Q6STE5 483 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 CASP12Q6UXS9 341 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF620Q6ZNG0 422 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 OAFQ86UD1 273 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 ENTHD1Q8IYW4 607 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 C8orf59Q8N0T1 100 aaPredicted RBP3□□□□□ -1.93
PTCD3-216ENST00000487043 GTPBP8Q8N3Z3 284 aaPredicted RBP3□□□□□ -1.93
PTCD3-216ENST00000487043 LRRC75AQ8NAA5 344 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 MDS2Q8NDY4 140 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 FDCSPQ8NFU4 85 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 OR2M7Q8NG81 312 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 OR8D4Q8NGM9 314 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 OR13F1Q8NGS4 319 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 OR51A7Q8NH64 312 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 PFN4Q8NHR9 129 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 MFSD8Q8NHS3 518 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 TEX47Q8TBZ9 253 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 FAM222BQ8WU58 562 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 C17orf50Q8WW18 174 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 DDIT4LQ96D03 193 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 FAM122AQ96E09 287 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 KIR2DL4Q99706 377 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 TSSK6Q9BXA6 273 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 PLA2G12AQ9BZM1 189 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 ACTR6Q9GZN1 396 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 OR52D1Q9H346 318 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 NCOR1P1Q9H4R4 102 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 GLRX2Q9NS18 164 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 TREM2Q9NZC2 230 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF229Q9UJW7 825 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 BAIAP2Q9UQB8 552 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 TRAPPC4Q9Y296 219 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 STARD10Q9Y365 291 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF337Q9Y3M9 751 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 CSAG2Q9Y5P2 127 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 CDH10Q9Y6N8 788 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 CPAMD8Q8IZJ3 1885 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 WDFY3Q8IZQ1 3526 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 SPTBN4Q9H254 2564 aa3□□□□□ -1.93
PTCD3-216ENST00000487043 TRAV27A0A087WT01 109 aa2.99□□□□□ -1.93
PTCD3-216ENST00000487043 TRAV17A0A0B4J275 112 aa2.99□□□□□ -1.93
PTCD3-216ENST00000487043 LOC102725191A0A1B0GVB3 256 aa2.99□□□□□ -1.93
PTCD3-216ENST00000487043 PINLYPA6NC86 204 aa2.99□□□□□ -1.93
PTCD3-216ENST00000487043 CCDC182A6NF36 153 aa2.99□□□□□ -1.93
PTCD3-216ENST00000487043 GJE1A6NN92 205 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms