RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 SSX3Q99909 188 aa10.19□□□□□ -0.78
PTCD1-205ENST00000485746 BEX1Q9HBH7 125 aa10.19□□□□□ -0.78
PTCD1-205ENST00000485746 TAS2R3Q9NYW6 316 aa10.19□□□□□ -0.78
PTCD1-205ENST00000485746 IL36GQ9NZH8 169 aa10.19□□□□□ -0.78
PTCD1-205ENST00000485746 TRAV24A0A0B4J272 114 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 MAGEA13PA6NCF6 341 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 H3BUX3 64 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 TOR1AO14656 332 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 PIN1P1O15428 100 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 CRTAPO75718 401 aaPredicted RBP10.18□□□□□ -0.78
PTCD1-205ENST00000485746 CSN2P05814 226 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 CDK2P24941 298 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 MAP2K4P45985 399 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 KCNJ3P48549 501 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 RAG2P55895 527 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 INSL4Q14641 139 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 IRF3Q14653 427 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 FAM189A2Q15884 450 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 LY6EQ16553 131 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 LRRC75BQ2VPJ9 315 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 HSD17B12Q53GQ0 312 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 GLT8D1Q68CQ7 371 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 UNQ9370/PRO34162Q6UXP9 181 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 TCF23Q7RTU1 214 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 LINC00596Q86U02 117 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 SUMF2Q8NBJ7 301 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 C17orf50Q8WW18 174 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 CORO2AQ92828 525 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 FOXRED1Q96CU9 486 aaPredicted RBP10.18□□□□□ -0.78
PTCD1-205ENST00000485746 DPCDQ9BVM2 203 aaPredicted RBP10.18□□□□□ -0.78
PTCD1-205ENST00000485746 CLEC7AQ9BXN2 247 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 PPIL3Q9H2H8 161 aaKnown RBP10.18□□□□□ -0.78
PTCD1-205ENST00000485746 TMEM133Q9H2Q1 129 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 C1RLQ9NZP8 487 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 VPREB3Q9UKI3 123 aa10.18□□□□□ -0.78
PTCD1-205ENST00000485746 LSM2Q9Y333 95 aaKnown RBP10.18□□□□□ -0.78
PTCD1-205ENST00000485746 TBL2Q9Y4P3 447 aaKnown RBP10.18□□□□□ -0.78
PTCD1-205ENST00000485746 IGHV2-26A0A0B4J1V2 119 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 A0A1B0GUS0 222 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 ZNF729A6NN14 1252 aaPredicted RBP10.17□□□□□ -0.78
PTCD1-205ENST00000485746 POM121CA8CG34 1229 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 GEMIN2O14893 280 aaKnown RBP10.17□□□□□ -0.78
PTCD1-205ENST00000485746 MDKP21741 143 aaPredicted RBP10.17□□□□□ -0.78
PTCD1-205ENST00000485746 NFYBP25208 207 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 PAX6P26367 422 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 RPL15P61313 204 aaKnown RBP10.17□□□□□ -0.78
PTCD1-205ENST00000485746 MLLT11Q13015 90 aaPredicted RBP10.17□□□□□ -0.78
PTCD1-205ENST00000485746 TRAM1Q15629 374 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 SSX2Q16385 188 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 TAF9Q16594 264 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 MPV17LQ2QL34 196 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 LHFPL4Q7Z7J7 247 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 ABHD12Q8N2K0 398 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 Q8NFD4 153 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 OR11H6Q8NGC7 330 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 MALSU1Q96EH3 234 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 COQ2Q96H96 371 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 MEGF9Q9H1U4 602 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 BANF2Q9H503 90 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 ISYNA1Q9NPH2 558 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 KIF25Q9UIL4 384 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 HILPDAQ9Y5L2 63 aa10.17□□□□□ -0.78
PTCD1-205ENST00000485746 COL6A5A8TX70 2615 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 A0A1W2PP11 408 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 FAM172BPA6NC97 362 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 MCRIP1C9JLW8 97 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 H3BUI4 141 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 MMP23AO75900 390 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 SRMP19623 302 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 PRRX1P54821 245 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 RPS25P62851 125 aaKnown RBP10.16□□□□□ -0.78
PTCD1-205ENST00000485746 LTC4SQ16873 150 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 NHLRC3Q5JS37 347 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 FAM27D1Q5T7N8 215 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 ZNF626Q68DY1 528 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 BRICD5Q6PL45 260 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 HEPN1Q6WQI6 88 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 RTN4RL2Q86UN3 420 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 ZNF596Q8TC21 504 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 MRGPRDQ8TDS7 321 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 PHYHIPQ92561 330 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 MRPS24Q96EL2 167 aaKnown RBP10.16□□□□□ -0.78
PTCD1-205ENST00000485746 MGLLQ99685 303 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 UQCC2Q9BRT2 126 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 ZNF747Q9BV97 191 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 SELENOIQ9C0D9 397 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 SPACA1Q9HBV2 294 aa10.16□□□□□ -0.78
PTCD1-205ENST00000485746 RRP15Q9Y3B9 282 aaKnown RBP10.16□□□□□ -0.78
PTCD1-205ENST00000485746 KBTBD11-OT1A0A1B0GTJ5 212 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 TMEM30CPA0ZSE6 113 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 ODF3BA8MYP8 253 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 ARL6IP5O75915 188 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 NDUFA7O95182 113 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 MGMTP16455 207 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 CPEP16870 476 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 PSMA1P25786 263 aaKnown RBP10.15□□□□□ -0.78
PTCD1-205ENST00000485746 HTR1DP28221 377 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 TPBGQ13641 420 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 RBM39Q14498 530 aaKnown RBP10.15□□□□□ -0.78
PTCD1-205ENST00000485746 MINOS1Q5TGZ0 78 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms