RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ELP2Q6IA86 826 aa20.52■□□□□ 0.88
HLA-F-227ENST00000485513 CCDC144NLQ6NUI1 221 aa20.52■□□□□ 0.88
HLA-F-227ENST00000485513 Q6ZPA2 131 aa20.52■□□□□ 0.88
HLA-F-227ENST00000485513 CCDC121Q6ZUS5 278 aa20.52■□□□□ 0.88
HLA-F-227ENST00000485513 PXT1Q8NFP0 134 aa20.52■□□□□ 0.88
HLA-F-227ENST00000485513 OR52I1Q8NGK6 324 aa20.52■□□□□ 0.88
HLA-F-227ENST00000485513 SLC29A1Q99808 456 aa20.52■□□□□ 0.88
HLA-F-227ENST00000485513 RPL36Q9Y3U8 105 aaKnown RBP20.52■□□□□ 0.88
HLA-F-227ENST00000485513 LOC100130705A0A1B0GUX0 176 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 OOSP1A8MZH6 123 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 LY6LH3BQJ8 138 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 MAGEB3O15480 346 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 RAB3AP20336 220 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 MNDAP41218 407 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 GLP1RP43220 463 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 ZSCAN26Q16670 478 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 UTF1Q5T230 341 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 SATL1Q86VE3 508 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 ZNF565Q8N9K5 539 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 HAVCR2Q8TDQ0 301 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 SGCDQ92629 289 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 KIRREL1Q96J84 757 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 GPER1Q99527 375 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 MRPS18AQ9NVS2 196 aaKnown RBP20.51■□□□□ 0.87
HLA-F-227ENST00000485513 KIF25Q9UIL4 384 aa20.51■□□□□ 0.87
HLA-F-227ENST00000485513 MEIKINA0A087WXM9 373 aa20.5■□□□□ 0.87
HLA-F-227ENST00000485513 CGB3P0DN86 165 aa20.5■□□□□ 0.87
HLA-F-227ENST00000485513 CGB7P0DN87 165 aa20.5■□□□□ 0.87
HLA-F-227ENST00000485513 KLHL22Q53GT1 634 aa20.5■□□□□ 0.87
HLA-F-227ENST00000485513 OR9G1Q8NH87 305 aa20.5■□□□□ 0.87
HLA-F-227ENST00000485513 CNIH3Q8TBE1 160 aa20.5■□□□□ 0.87
HLA-F-227ENST00000485513 TNFAIP8L1Q8WVP5 186 aa20.5■□□□□ 0.87
HLA-F-227ENST00000485513 NECAP2Q9NVZ3 263 aa20.5■□□□□ 0.87
HLA-F-227ENST00000485513 FAM118AQ9NWS6 357 aa20.5■□□□□ 0.87
HLA-F-227ENST00000485513 CALYQ9NYX4 217 aa20.5■□□□□ 0.87
HLA-F-227ENST00000485513 TRAV24A0A0B4J272 114 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 GABRPO00591 440 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 PIN1P1O15428 100 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 PF4V1P10720 104 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 SOX2P48431 317 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 GTF2A1P52655 376 aaPredicted RBP20.49■□□□□ 0.87
HLA-F-227ENST00000485513 IL13RA2Q14627 380 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 ZNF529Q6P280 563 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 OR51A2Q8NGJ7 313 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 OR13A1Q8NGR1 328 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 PHF21AQ96BD5 680 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 BARHL1Q9BZE3 327 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 NCOR1P1Q9H4R4 102 aa20.49■□□□□ 0.87
HLA-F-227ENST00000485513 TCRBV4S1A1TA0A5B7 111 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 AMY1AP04745 511 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 AMY2AP04746 511 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 LIMS3P0CW19 117 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 LIMS4P0CW20 117 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 CD33P20138 364 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 C21orf33P30042 268 aaPredicted RBP20.48■□□□□ 0.87
HLA-F-227ENST00000485513 RSU1Q15404 277 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 TCTEX1D4Q5JR98 221 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 OR10K1Q8NGX5 313 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 MRAPQ8TCY5 172 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 APH1BQ8WW43 257 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 RGP1Q92546 391 aaPredicted RBP20.48■□□□□ 0.87
HLA-F-227ENST00000485513 TOMM40LQ969M1 308 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 RPEQ96AT9 228 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 JAM3Q9BX67 310 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 FAM192AQ9GZU8 254 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 PCDHB16Q9NRJ7 776 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 TAS2R4Q9NYW5 299 aa20.48■□□□□ 0.87
HLA-F-227ENST00000485513 AMMECR1Q9Y4X0 333 aaPredicted RBP20.48■□□□□ 0.87
HLA-F-227ENST00000485513 TSSC4Q9Y5U2 329 aaPredicted RBP20.48■□□□□ 0.87
HLA-F-227ENST00000485513 SH2D7A6NKC9 451 aaPredicted RBP20.47■□□□□ 0.87
HLA-F-227ENST00000485513 M0QZK8 103 aa20.47■□□□□ 0.87
HLA-F-227ENST00000485513 FAM106CPP0CH98 169 aa20.47■□□□□ 0.87
HLA-F-227ENST00000485513 PIGYQ3MUY2 71 aa20.47■□□□□ 0.87
HLA-F-227ENST00000485513 WFDC9Q8NEX5 89 aa20.47■□□□□ 0.87
HLA-F-227ENST00000485513 OR4X2Q8NGF9 303 aa20.47■□□□□ 0.87
HLA-F-227ENST00000485513 GPR148Q8TDV2 347 aa20.47■□□□□ 0.87
HLA-F-227ENST00000485513 S100A14Q9HCY8 104 aa20.47■□□□□ 0.87
HLA-F-227ENST00000485513 IDI2-AS1Q9NZ38 188 aa20.47■□□□□ 0.87
HLA-F-227ENST00000485513 J3QR06 171 aa20.46■□□□□ 0.87
HLA-F-227ENST00000485513 IL1AP01583 271 aa20.46■□□□□ 0.87
HLA-F-227ENST00000485513 CD2P06729 351 aa20.46■□□□□ 0.87
HLA-F-227ENST00000485513 C9orf152Q5JTZ5 239 aa20.46■□□□□ 0.87
HLA-F-227ENST00000485513 RSBN1Q5VWQ0 802 aaPredicted RBP20.46■□□□□ 0.87
HLA-F-227ENST00000485513 PQLC1Q8N2U9 271 aa20.46■□□□□ 0.87
HLA-F-227ENST00000485513 Q8NFD4 153 aa20.46■□□□□ 0.87
HLA-F-227ENST00000485513 LEAP2Q969E1 77 aa20.46■□□□□ 0.87
HLA-F-227ENST00000485513 MYDGFQ969H8 173 aa20.46■□□□□ 0.87
HLA-F-227ENST00000485513 LINC00574Q9H8X3 128 aa20.46■□□□□ 0.87
HLA-F-227ENST00000485513 FGF20Q9NP95 211 aaPredicted RBP20.46■□□□□ 0.87
HLA-F-227ENST00000485513 HTR3BO95264 441 aa20.45■□□□□ 0.86
HLA-F-227ENST00000485513 IGHV3-7P01780 117 aa20.45■□□□□ 0.86
HLA-F-227ENST00000485513 KCNJ3P48549 501 aa20.45■□□□□ 0.86
HLA-F-227ENST00000485513 PAX5Q02548 391 aa20.45■□□□□ 0.86
HLA-F-227ENST00000485513 CCDC58Q4VC31 144 aa20.45■□□□□ 0.86
HLA-F-227ENST00000485513 RPL22L1Q6P5R6 122 aaKnown RBP20.45■□□□□ 0.86
HLA-F-227ENST00000485513 ASCL4Q6XD76 172 aa20.45■□□□□ 0.86
HLA-F-227ENST00000485513 THNSL2Q86YJ6 484 aa20.45■□□□□ 0.86
HLA-F-227ENST00000485513 PLPPR1Q8TBJ4 325 aa20.45■□□□□ 0.86
HLA-F-227ENST00000485513 MRGPRDQ8TDS7 321 aa20.45■□□□□ 0.86
HLA-F-227ENST00000485513 AURKAIP1Q9NWT8 199 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms