RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TDRD15B5MCY1 1934 aaKnown RBP3.2□□□□□ -1.9
PTCD3-214ENST00000483925 CACNA1FO60840 1977 aa3.2□□□□□ -1.9
PTCD3-214ENST00000483925 MYO15BQ96JP2 1530 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 WDR81Q562E7 1941 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 RALGAPA1Q6GYQ0 2036 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 IGLV1-50A0A075B6I6 118 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 A0A1B0GV72 72 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 EPOPA6NHQ4 379 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 K7EPK0 472 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 COPEO14579 308 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 FFAR1O14842 300 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 COX7A2P2O60397 106 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 CYB5R3P00387 301 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-214ENST00000483925 HBZP02008 142 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 SCGB1C2P0DMR2 95 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 GABRA1P14867 456 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 NELFEP18615 380 aaKnown RBP3.19□□□□□ -1.9
PTCD3-214ENST00000483925 IL3RAP26951 378 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 CXCL5P42830 114 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 UBE2AP49459 152 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 CRIP2P52943 208 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-214ENST00000483925 DAD1P61803 113 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 PPP1CAP62136 330 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 CDK5Q00535 292 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 SKP2Q13309 424 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 ZNF684Q5T5D7 378 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 ZNF544Q6NX49 715 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 NCCRP1Q6ZVX7 275 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-214ENST00000483925 SLC36A1Q7Z2H8 476 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 NAA40Q86UY6 237 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 ZNF440Q8IYI8 595 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-214ENST00000483925 OR51D1Q8NGF3 324 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 OR11L1Q8NGX0 322 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 OR1P1Q8NH06 330 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 SCGB1C1Q8TD33 95 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 Q8WTZ3 238 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 DYDC1Q8WWB3 177 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 EXOSC8Q96B26 276 aaKnown RBP3.19□□□□□ -1.9
PTCD3-214ENST00000483925 C16orf74Q96GX8 76 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 YPEL4Q96NS1 127 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 PRSS27Q9BQR3 290 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 ANAPC13Q9BS18 74 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 TBL1XR1Q9BZK7 514 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 OR51I2Q9H344 312 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 NMNAT1Q9HAN9 279 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-214ENST00000483925 C19orf12Q9NSK7 152 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 TMEM216Q9P0N5 145 aa3.19□□□□□ -1.9
PTCD3-214ENST00000483925 KLF13Q9Y2Y9 288 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-214ENST00000483925 CARMIL3Q8ND23 1372 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 IGLV11-55A0A075B6I3 123 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 CCL15-CCL14A0A0B4J2E2 113 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 IGHV3-66A0A0C4DH42 116 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 ZFP92A6NM28 416 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 LAD1O00515 517 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 GYG2O15488 501 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 CHP2O43745 196 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 ANGPTL7O43827 346 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 EIF1BO60739 113 aaKnown RBP3.18□□□□□ -1.9
PTCD3-214ENST00000483925 CRYBA1P05813 215 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 OR4A8P0C604 315 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 CD79AP11912 226 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 CXCL3P19876 107 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 GADD45AP24522 165 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 CTRLP40313 264 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 EIF1P41567 113 aaKnown RBP3.18□□□□□ -1.9
PTCD3-214ENST00000483925 EMX1Q04741 257 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-214ENST00000483925 MEF2CQ06413 473 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-214ENST00000483925 SSX1Q16384 188 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 CCL15Q16663 113 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 PYCR3Q53H96 274 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 YIF1BQ5BJH7 314 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 ACSBG2Q5FVE4 666 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 SLC25A30Q5SVS4 291 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 NXNL2Q5VZ03 156 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 SPATA31B1PQ5VZV4 182 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 OTPQ5XKR4 325 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 GLYATQ6IB77 296 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 ZNF774Q6NX45 483 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 GUSBP11Q6P575 273 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 ZNF530Q6P9A1 599 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-214ENST00000483925 CEMP1Q6PRD7 247 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-214ENST00000483925 CLEC20AQ6ZU45 233 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 LINC00337Q8N6G1 96 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 ARIH2OSQ8N7S6 290 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 OR2M7Q8NG81 312 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 OR1L8Q8NGR8 309 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 OR1L1Q8NH94 360 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 TWIST2Q8WVJ9 160 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 TNFAIP8L1Q8WVP5 186 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 RNF157Q96PX1 679 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 LINC01587Q99440 93 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 VGLL1Q99990 258 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 CMSS1Q9BQ75 279 aaKnown RBP3.18□□□□□ -1.9
PTCD3-214ENST00000483925 ZNF649Q9BS31 505 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 RTBDNQ9BSG5 229 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-214ENST00000483925 ZNF717Q9BY31 904 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-214ENST00000483925 TRIM4Q9C037 500 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 MMP26Q9NRE1 261 aa3.18□□□□□ -1.9
PTCD3-214ENST00000483925 PSG11Q9UQ72 335 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms