RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SPAG7O75391 227 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 SEMA4FO95754 770 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 AIFM1O95831 613 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 EPPINO95925 133 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 IGHV3-9P01782 118 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 TTRP02766 147 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 CD55P08174 381 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 OR8U8P0C7N1 319 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 ZNF806P0C7X5 589 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 UBBP0CG47 229 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 LIFP15018 202 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 RPL7P18124 248 aaKnown RBP3.25□□□□□ -1.89
VPS41-212ENST00000482217 KDELR1P24390 212 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 MIPP30301 263 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 PRSS3P35030 304 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 EVX1P49640 407 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 WNT4P56705 351 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 EMX1Q04741 257 aaPredicted RBP3.25□□□□□ -1.89
VPS41-212ENST00000482217 PRDX4Q13162 271 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 IHHQ14623 411 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 LTC4SQ16873 150 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 ATP6AP1LQ52LC2 224 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 C1orf194Q5T5A4 169 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 LINC00242Q5T6M2 205 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 ZNF613Q6PF04 617 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 GSG1LQ6UXU4 331 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 FAM24BQ8N5W8 94 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 OR13C4Q8NGS5 318 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 MFSD8Q8NHS3 518 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 NPRL2Q8WTW4 380 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 CYGBQ8WWM9 190 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 FGF14Q92915 247 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 PIK3IP1Q96FE7 263 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 DCUN1D1Q96GG9 259 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 FMC1Q96HJ9 113 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 CAPZA3Q96KX2 299 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 FCRL1Q96LA6 429 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 BMFQ96LC9 184 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 BIRC8Q96P09 236 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 IP6K3Q96PC2 410 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 PLEKHF1Q96S99 279 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 SERPINI1Q99574 410 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 RNF126Q9BV68 326 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 GNB1LQ9BYB4 327 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 SLC17A9Q9BYT1 436 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 TAAR2Q9P1P5 351 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 U3KQ87 197 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 ITGB4P16144 1822 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 CCDC180Q9P1Z9 1646 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 USP6P35125 1406 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 MIA2Q96PC5 1412 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 IBTKQ9P2D0 1353 aaPredicted RBP3.25□□□□□ -1.89
VPS41-212ENST00000482217 AKAP11Q9UKA4 1901 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 PLXND1Q9Y4D7 1925 aa3.25□□□□□ -1.89
VPS41-212ENST00000482217 DOCK5Q9H7D0 1870 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 A0A096LPI6 279 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 TRAV8-4A0A0B4J246 113 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 A0A0G2JRQ6 117 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 SLC17A2O00624 439 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 RDH16O75452 317 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 CDS2O95674 445 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 P01737 135 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 SLC2A2P11168 524 aaPredicted RBP3.24□□□□□ -1.89
VPS41-212ENST00000482217 CD79AP11912 226 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 RPS3P23396 243 aaKnown RBP eCLIP3.24□□□□□ -1.89
VPS41-212ENST00000482217 BTCP35070 178 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 PFN2P35080 140 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 GGT2P36268 569 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 GPR6P46095 362 aaPredicted RBP3.24□□□□□ -1.89
VPS41-212ENST00000482217 NDUFA8P51970 172 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 RPS20P60866 119 aaKnown RBP3.24□□□□□ -1.89
VPS41-212ENST00000482217 PLCXD2Q0VAA5 305 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 FASTKQ14296 549 aaKnown RBP3.24□□□□□ -1.89
VPS41-212ENST00000482217 P2RY6Q15077 328 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 QPRTQ15274 297 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 RNF212Q495C1 297 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 MESTQ5EB52 335 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 TMEM255AQ5JRV8 349 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 KDM4DQ6B0I6 523 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 FBXL22Q6P050 247 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 HAGHLQ6PII5 290 aaPredicted RBP3.24□□□□□ -1.89
VPS41-212ENST00000482217 C19orf48Q6RUI8 117 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 Q6ZN92 141 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 GDPGP1Q6ZNW5 385 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 SNX29P2Q8IUI4 249 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 KLHDC8BQ8IXV7 354 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 FTMTQ8N4E7 242 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 TSTD1Q8NFU3 115 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 OR10AD1Q8NGE0 317 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 ZFAND1Q8TCF1 268 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 GPR119Q8TDV5 335 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 KLK6Q92876 244 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 TMEM230Q96A57 120 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 WBP1Q96G27 269 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 KCTD14Q9BQ13 255 aaPredicted RBP3.24□□□□□ -1.89
VPS41-212ENST00000482217 RHNO1Q9BSD3 238 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 SUCNR1Q9BXA5 334 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 TMEM222Q9H0R3 208 aa3.24□□□□□ -1.89
VPS41-212ENST00000482217 CALML5Q9NZT1 146 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms