RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ZNF729A6NN14 1252 aaPredicted RBP14.82□□□□□ -0.04
CLK1-211ENST00000481641 LY6LH3BQJ8 138 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 WBP4O75554 376 aaKnown RBP14.82□□□□□ -0.04
CLK1-211ENST00000481641 LPLP06858 475 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 CGB3P0DN86 165 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 CGB7P0DN87 165 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 RAB3AP20336 220 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 GLP1RP43220 463 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 ETV1P50549 477 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 MRPL28Q13084 256 aaKnown RBP14.82□□□□□ -0.04
CLK1-211ENST00000481641 PIGYQ3MUY2 71 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 ABCA11PQ4W5N1 156 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 PAN3Q58A45 887 aaKnown RBP14.82□□□□□ -0.04
CLK1-211ENST00000481641 TPTE2P1Q5T6R2 138 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 ELP2Q6IA86 826 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 ZNF529Q6P280 563 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 OR51T1Q8NGJ9 327 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 CNIH3Q8TBE1 160 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 PLPPR1Q8TBJ4 325 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 KIRREL1Q96J84 757 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 JAM3Q9BX67 310 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 FAM192AQ9GZU8 254 aa14.82□□□□□ -0.04
CLK1-211ENST00000481641 SIRT4Q9Y6E7 314 aaPredicted RBP14.82□□□□□ -0.04
CLK1-211ENST00000481641 MEIKINA0A087WXM9 373 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 TRAV39A0A0B4J263 110 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 KBTBD11-OT1A0A1B0GTJ5 212 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 BAG2O95816 211 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 RPSAP08865 295 aaKnown RBP14.81□□□□□ -0.04
CLK1-211ENST00000481641 PRRX1P54821 245 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 LTC4SQ16873 150 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 KLHL22Q53GT1 634 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 TCTEX1D4Q5JR98 221 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 OR2G6Q5TZ20 316 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 C10orf99Q6UWK7 81 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 PXT1Q8NFP0 134 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 OR4F17Q8NGA8 305 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 CAPSLQ8WWF8 208 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 ORAI1Q96D31 301 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 RBM14Q96PK6 669 aaKnown RBP14.81□□□□□ -0.04
CLK1-211ENST00000481641 OR4F4Q96R69 305 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 LIN7BQ9HAP6 207 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 FGF20Q9NP95 211 aaPredicted RBP14.81□□□□□ -0.04
CLK1-211ENST00000481641 OR6C3Q9NZP0 311 aa14.81□□□□□ -0.04
CLK1-211ENST00000481641 A0A087X0M5 115 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 A0A1B0GX30 115 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 H3BUI4 141 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 MAGEB3O15480 346 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 OR2F2O95006 317 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 CDRT1O95170 752 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 HTR3BO95264 441 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 CLIC3O95833 236 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 AMY1AP04745 511 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 AMY2AP04746 511 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 ALDOBP05062 364 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 CD83Q01151 205 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 RSU1Q15404 277 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 C16orf82Q7Z2V1 217 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 CENPVQ7Z7K6 275 aaPredicted RBP14.8□□□□□ -0.04
CLK1-211ENST00000481641 C10orf67Q8IYJ2 551 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 RFESDQ8TAC1 157 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 CALYQ9NYX4 217 aa14.8□□□□□ -0.04
CLK1-211ENST00000481641 XPNPEP2O43895 674 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 CEACAM3P40198 252 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 DIAPH2-AS1Q14236 149 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 IL13RA2Q14627 380 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 C9orf152Q5JTZ5 239 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 RSBN1Q5VWQ0 802 aaPredicted RBP14.79□□□□□ -0.04
CLK1-211ENST00000481641 RPL22L1Q6P5R6 122 aaKnown RBP14.79□□□□□ -0.04
CLK1-211ENST00000481641 Q6ZPA2 131 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 OR13C5Q8NGS8 318 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 DNAH3Q8TD57 4116 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 MRGPRDQ8TDS7 321 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 GPR148Q8TDV2 347 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 AKR1E2Q96JD6 320 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 IDI2-AS1Q9NZ38 188 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 ING4Q9UNL4 249 aa14.79□□□□□ -0.04
CLK1-211ENST00000481641 LALBAP00709 142 aa14.78□□□□□ -0.04
CLK1-211ENST00000481641 ARHGDIBP52566 201 aa14.78□□□□□ -0.04
CLK1-211ENST00000481641 ASCL4Q6XD76 172 aa14.78□□□□□ -0.04
CLK1-211ENST00000481641 ZNF565Q8N9K5 539 aa14.78□□□□□ -0.04
CLK1-211ENST00000481641 ZNF555Q8NEP9 628 aa14.78□□□□□ -0.04
CLK1-211ENST00000481641 OR9G1Q8NH87 305 aa14.78□□□□□ -0.04
CLK1-211ENST00000481641 TMEM106AQ96A25 262 aa14.78□□□□□ -0.04
CLK1-211ENST00000481641 CREB3L1Q96BA8 519 aa14.78□□□□□ -0.04
CLK1-211ENST00000481641 BARHL1Q9BZE3 327 aa14.78□□□□□ -0.04
CLK1-211ENST00000481641 SMPD3Q9NY59 655 aaPredicted RBP14.78□□□□□ -0.04
CLK1-211ENST00000481641 CLEC2DQ9UHP7 191 aa14.78□□□□□ -0.04
CLK1-211ENST00000481641 TCRBV4S1A1TA0A5B7 111 aa14.77□□□□□ -0.05
CLK1-211ENST00000481641 J3QR06 171 aa14.77□□□□□ -0.05
CLK1-211ENST00000481641 IL1AP01583 271 aa14.77□□□□□ -0.05
CLK1-211ENST00000481641 C21orf33P30042 268 aaPredicted RBP14.77□□□□□ -0.05
CLK1-211ENST00000481641 SSTR5P35346 364 aa14.77□□□□□ -0.05
CLK1-211ENST00000481641 MNDAP41218 407 aa14.77□□□□□ -0.05
CLK1-211ENST00000481641 GNG10P50151 68 aa14.77□□□□□ -0.05
CLK1-211ENST00000481641 SUMF2Q8NBJ7 301 aa14.77□□□□□ -0.05
CLK1-211ENST00000481641 Q8NFD4 153 aa14.77□□□□□ -0.05
CLK1-211ENST00000481641 SGCDQ92629 289 aa14.77□□□□□ -0.05
CLK1-211ENST00000481641 MYDGFQ969H8 173 aa14.77□□□□□ -0.05
CLK1-211ENST00000481641 TOMM40LQ969M1 308 aa14.77□□□□□ -0.05
CLK1-211ENST00000481641 RPEQ96AT9 228 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms