RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 ANAPC10Q9UM13 185 aa6.88□□□□□ -1.31
SYNE1-225ENST00000481502 PCDHB10Q9UN67 800 aa6.88□□□□□ -1.31
SYNE1-225ENST00000481502 MRPS7Q9Y2R9 242 aaKnown RBP6.88□□□□□ -1.31
SYNE1-225ENST00000481502 KCNK7Q9Y2U2 307 aa6.88□□□□□ -1.31
SYNE1-225ENST00000481502 CACNG2Q9Y698 323 aa6.88□□□□□ -1.31
SYNE1-225ENST00000481502 ABCA12Q86UK0 2595 aa6.88□□□□□ -1.31
SYNE1-225ENST00000481502 HRNRQ86YZ3 2850 aaPredicted RBP6.87□□□□□ -1.31
SYNE1-225ENST00000481502 A0A0G2JMP0 313 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 A0A0X1KG70 313 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 hADV38S2A0JD32 116 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 TMEM82A0PJX8 343 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 CEACAM18A8MTB9 384 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 ADAM20O43506 726 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 ORC5O43913 435 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 NDUFS7O75251 213 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 FOXH1O75593 365 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 GYPAP02724 150 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 RBP4P02753 201 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 MT-ND4P03905 459 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 CD80P33681 288 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 RCVRNP35243 200 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 OR3A1P47881 315 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 P2RX3P56373 397 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 KRTAP10-9P60411 292 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 SCN1BQ07699 218 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 LOXL1Q08397 574 aaPredicted RBP6.87□□□□□ -1.31
SYNE1-225ENST00000481502 DYRK1AQ13627 763 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 ARFRP1Q13795 201 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 GRK1Q15835 563 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 ZNF79Q15937 498 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 CLEC12BQ2HXU8 276 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 Q3ZCU0 254 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 ACTBL2Q562R1 376 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 C6orf183Q5T699 404 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 RSBN1Q5VWQ0 802 aaPredicted RBP6.87□□□□□ -1.31
SYNE1-225ENST00000481502 ZNF841Q6ZN19 808 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 C1orf122Q6ZSJ8 110 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 GDPD3Q7L5L3 318 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 C6orf201Q7Z4U5 140 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 HOGA1Q86XE5 327 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 TGIF2LYQ8IUE0 185 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 Q8N402 240 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 ZNF525Q8N782 197 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 ASCC1Q8N9N2 400 aaKnown RBP6.87□□□□□ -1.31
SYNE1-225ENST00000481502 BOLLQ8N9W6 283 aaKnown RBP6.87□□□□□ -1.31
SYNE1-225ENST00000481502 DEFB108BQ8NET1 73 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 OR4M2Q8NGB6 313 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 BORCS5Q969J3 196 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 C1orf159Q96HA4 380 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 SULT4A1Q9BR01 284 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 C7orf50Q9BRJ6 194 aaKnown RBP6.87□□□□□ -1.31
SYNE1-225ENST00000481502 THAP7Q9BT49 309 aaPredicted RBP6.87□□□□□ -1.31
SYNE1-225ENST00000481502 FAAP24Q9BTP7 215 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 SRRQ9GZT4 340 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 KCNK15Q9H427 330 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 DCAF16Q9NXF7 216 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 IL36RNQ9UBH0 155 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 SLC25A10Q9UBX3 287 aaPredicted RBP6.87□□□□□ -1.31
SYNE1-225ENST00000481502 CLN8Q9UBY8 286 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 UBE2J1Q9Y385 318 aaPredicted RBP6.87□□□□□ -1.31
SYNE1-225ENST00000481502 LINC00312Q9Y6C7 94 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 CENPEQ02224 2701 aa6.87□□□□□ -1.31
SYNE1-225ENST00000481502 ISPDA4D126 451 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 LYNX1G3V0Z9 82 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 SIRPB1O00241 398 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 DVL1O14640 695 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 IGHV2-5P01817 119 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 CSF1P09603 554 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 LYNX1P0DP58 116 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 RPS2P15880 293 aaKnown RBP6.86□□□□□ -1.31
SYNE1-225ENST00000481502 GNB3P16520 340 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 GATA3P23771 443 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 DUSP1P28562 367 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 TAS2R46P59540 309 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 ESCO2Q56NI9 601 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 PYDC2Q56P42 97 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 KRBOX4Q5JUW0 171 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 NKAPLQ5M9Q1 402 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 LY6G6FQ5SQ64 297 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 FAM201AQ5SY85 155 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 WDR25Q64LD2 544 aaPredicted RBP6.86□□□□□ -1.31
SYNE1-225ENST00000481502 ZNRF1Q8ND25 227 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 OR4S1Q8NGB4 309 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 OR5T2Q8NGG2 359 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 OR52M1Q8NGK5 317 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 NEK7Q8TDX7 302 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 PERPQ96FX8 193 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 CCL13Q99616 98 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 DCTN5Q9BTE1 182 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 BPESC1Q9GZL8 116 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 GHITMQ9H3K2 345 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 Q9N2K0 584 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 KCNIP1Q9NZI2 227 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 SLC23A1Q9UHI7 598 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 AK3Q9UIJ7 227 aa6.86□□□□□ -1.31
SYNE1-225ENST00000481502 IGHV3OR15-7A0A075B7D8 119 aa6.85□□□□□ -1.31
SYNE1-225ENST00000481502 TRGV10A0A0A0MS01 117 aa6.85□□□□□ -1.31
SYNE1-225ENST00000481502 hCG_1809904A0A1W2PP81 198 aa6.85□□□□□ -1.31
SYNE1-225ENST00000481502 A0A1W2PPE2 198 aa6.85□□□□□ -1.31
SYNE1-225ENST00000481502 A0A1W2PR64 198 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms