RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 CECR9P0C854 216 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 VAX1Q5SQQ9 334 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 RPEQ96AT9 228 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 SNX22Q96L94 193 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 JTBO76095 146 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 KITLGP21583 273 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 CCL1P22362 96 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 BRICD5Q6PL45 260 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 RNF141Q8WVD5 230 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 SLC35E1Q96K37 410 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 COL10A1Q03692 680 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 LILRB1Q8NHL6 650 aaPredicted RBP16.6■□□□□ 0.25
CCM2-214ENST00000481194 OR2D2Q9H210 308 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 CD40P25942 277 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 DHRS2Q13268 280 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 PEA15Q15121 130 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 NANPQ8TBE9 248 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 PLSCR4Q9NRQ2 329 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 FKBP11Q9NYL4 201 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 STRAPQ9Y3F4 350 aaKnown RBP16.6■□□□□ 0.25
CCM2-214ENST00000481194 RFPL4AA6NLU0 287 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 RFPL4AL1F8VTS6 287 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 DEFA4P12838 97 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 ZNF260Q3ZCT1 412 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 ITLN1Q8WWA0 313 aa16.6■□□□□ 0.25
CCM2-214ENST00000481194 RBMXL1Q96E39 390 aaKnown RBP16.6■□□□□ 0.25
CCM2-214ENST00000481194 RP1P56715 2156 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 LRRK1Q38SD2 2015 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 OR2B11Q5JQS5 317 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 APOBEC3AP31941 199 aaPredicted RBP16.59■□□□□ 0.25
CCM2-214ENST00000481194 LYG1Q8N1E2 194 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 AQP3Q92482 292 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 GNPNAT1Q96EK6 184 aaPredicted RBP16.59■□□□□ 0.25
CCM2-214ENST00000481194 TAF9BQ9HBM6 251 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 LMX1BO60663 402 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 NAT2P11245 290 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 UBE2V2Q15819 145 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 IGHV2OR16-5A0A0B4J2B6 119 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 FCGR3AP08637 254 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 PPP1R1AQ13522 171 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 NPAS1Q99742 590 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 HEXA-AS1Q9H8Q6 139 aa16.59■□□□□ 0.25
CCM2-214ENST00000481194 SLC25A10Q9UBX3 287 aaPredicted RBP16.59■□□□□ 0.25
CCM2-214ENST00000481194 RPA2P15927 270 aa16.58■□□□□ 0.25
CCM2-214ENST00000481194 CD80P33681 288 aa16.58■□□□□ 0.25
CCM2-214ENST00000481194 RAB13P51153 203 aa16.58■□□□□ 0.25
CCM2-214ENST00000481194 IL36GQ9NZH8 169 aa16.58■□□□□ 0.25
CCM2-214ENST00000481194 OR2W1Q9Y3N9 320 aa16.58■□□□□ 0.25
CCM2-214ENST00000481194 TMEM14DPA8MWL7 114 aa16.58■□□□□ 0.24
CCM2-214ENST00000481194 ICMTO60725 284 aa16.58■□□□□ 0.24
CCM2-214ENST00000481194 MARS2Q96GW9 593 aaKnown RBP16.58■□□□□ 0.24
CCM2-214ENST00000481194 ADGRG7Q96K78 797 aa16.58■□□□□ 0.24
CCM2-214ENST00000481194 Q96M66 194 aa16.58■□□□□ 0.24
CCM2-214ENST00000481194 REPIN1Q9BWE0 567 aaKnown RBP16.58■□□□□ 0.24
CCM2-214ENST00000481194 GPR6P46095 362 aaPredicted RBP16.58■□□□□ 0.24
CCM2-214ENST00000481194 MOB3BQ86TA1 216 aa16.58■□□□□ 0.24
CCM2-214ENST00000481194 OR52B4Q8NGK2 314 aa16.58■□□□□ 0.24
CCM2-214ENST00000481194 POM121L2Q96KW2 1035 aa16.58■□□□□ 0.24
CCM2-214ENST00000481194 ZNF251Q9BRH9 671 aa16.58■□□□□ 0.24
CCM2-214ENST00000481194 DENND4AQ7Z401 1863 aa16.58■□□□□ 0.24
CCM2-214ENST00000481194 PPYP01298 95 aa16.58■□□□□ 0.24
CCM2-214ENST00000481194 TAS2R30P59541 319 aa16.58■□□□□ 0.24
CCM2-214ENST00000481194 RBMXL3Q8N7X1 1067 aaKnown RBP16.58■□□□□ 0.24
CCM2-214ENST00000481194 Q3ZCU0 254 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 ELP2Q6IA86 826 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 OR13D1Q8NGV5 346 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 RRASP10301 218 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 SLC25A42Q86VD7 318 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 OR10P1Q8NGE3 313 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 OR4S2Q8NH73 311 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 RFESDQ8TAC1 157 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 SLC25A38Q96DW6 304 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 IQCF6A8MYZ5 107 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 LGALS8O00214 317 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 SSSCA1O60232 199 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 RPL12P30050 165 aaKnown RBP16.57■□□□□ 0.24
CCM2-214ENST00000481194 GNG10P50151 68 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 ZNF816Q0VGE8 651 aaPredicted RBP16.57■□□□□ 0.24
CCM2-214ENST00000481194 SSX9Q7RTT3 188 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 ASCC3Q8N3C0 2202 aaKnown RBP16.57■□□□□ 0.24
CCM2-214ENST00000481194 CACNA1CQ13936 2221 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 FAM27E3Q08E93 113 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 SCARB1Q8WTV0 552 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 CLCF1Q9UBD9 225 aa16.57■□□□□ 0.24
CCM2-214ENST00000481194 KLK2P20151 261 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 LPAR6P43657 344 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 BARX1Q9HBU1 254 aaPredicted RBP16.56■□□□□ 0.24
CCM2-214ENST00000481194 ZNF355PQ9NSJ1 428 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 PSENENQ9NZ42 101 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 MBD3L4A6NDZ8 208 aaPredicted RBP16.56■□□□□ 0.24
CCM2-214ENST00000481194 MBD3L3A6NE82 208 aaPredicted RBP16.56■□□□□ 0.24
CCM2-214ENST00000481194 MBD3L5A6NJ08 208 aaPredicted RBP16.56■□□□□ 0.24
CCM2-214ENST00000481194 GPR37O15354 613 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 CLINT1Q14677 625 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 MBD3L2Q8NHZ7 208 aaPredicted RBP16.56■□□□□ 0.24
CCM2-214ENST00000481194 RGP1Q92546 391 aaPredicted RBP16.56■□□□□ 0.24
CCM2-214ENST00000481194 PIPOXQ9P0Z9 390 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 CLN8Q9UBY8 286 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 OR2H2O95918 312 aa16.56■□□□□ 0.24
CCM2-214ENST00000481194 HSD17B10Q99714 261 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms