RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 CSN2P05814 226 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 CD34P28906 385 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 PRRX1P54821 245 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 ZP1P60852 638 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 ADARB1P78563 741 aaKnown RBP12.18□□□□□ -0.46
LIMS3-203ENST00000480744 CDK5R1Q15078 307 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 PAN3Q58A45 887 aaKnown RBP12.18□□□□□ -0.46
LIMS3-203ENST00000480744 KHDC1LQ5JSQ8 128 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 TPTE2P1Q5T6R2 138 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 SATL1Q86VE3 508 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 SERPINA12Q8IW75 414 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 SYS1Q8N2H4 156 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 OR5AK2Q8NH90 309 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 CREB3L1Q96BA8 519 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 PHF21AQ96BD5 680 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 RBM14Q96PK6 669 aaKnown RBP12.18□□□□□ -0.46
LIMS3-203ENST00000480744 GPER1Q99527 375 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 NECAP2Q9NVZ3 263 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 OR6C3Q9NZP0 311 aa12.18□□□□□ -0.46
LIMS3-203ENST00000480744 MEIKINA0A087WXM9 373 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 WBP4O75554 376 aaKnown RBP12.17□□□□□ -0.46
LIMS3-203ENST00000480744 IGHV3-7P01780 117 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 CCDC159P0C7I6 412 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 IGLL1P15814 213 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 MNDAP41218 407 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 MTNR1BP49286 362 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 GBX2P52951 348 aaPredicted RBP12.17□□□□□ -0.46
LIMS3-203ENST00000480744 CD83Q01151 205 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 SMN1Q16637 294 aaKnown RBP12.17□□□□□ -0.46
LIMS3-203ENST00000480744 C17orf58Q2M2W7 97 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 UTF1Q5T230 341 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 TNFAIP8L1Q8WVP5 186 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 CYGBQ8WWM9 190 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 Q96MT0 163 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 FAM192AQ9GZU8 254 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 AURKAIP1Q9NWT8 199 aaPredicted RBP12.17□□□□□ -0.46
LIMS3-203ENST00000480744 ERVK13-1Q9NX77 482 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 KIF25Q9UIL4 384 aa12.17□□□□□ -0.46
LIMS3-203ENST00000480744 KBTBD11-OT1A0A1B0GTJ5 212 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 MAGEB3O15480 346 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 MPZL2O60487 215 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 PF4P02776 101 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 RPSAP08865 295 aaKnown RBP12.16□□□□□ -0.46
LIMS3-203ENST00000480744 GNAO1P09471 354 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 RAB3AP20336 220 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 SOX2P48431 317 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 MRPL28Q13084 256 aaKnown RBP12.16□□□□□ -0.46
LIMS3-203ENST00000480744 LTC4SQ16873 150 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 CCDC144NLQ6NUI1 221 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 PARP16Q8N5Y8 322 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 ZNF555Q8NEP9 628 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 OR4X2Q8NGF9 303 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 OR52I1Q8NGK6 324 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 OR10K1Q8NGX5 313 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 OR9G1Q8NH87 305 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 CNIH3Q8TBE1 160 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 LEAP2Q969E1 77 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 MYDGFQ969H8 173 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 TOMM40LQ969M1 308 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 RPEQ96AT9 228 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 CPNE2Q96FN4 548 aaPredicted RBP12.16□□□□□ -0.46
LIMS3-203ENST00000480744 KIRREL1Q96J84 757 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 C8orf4Q9NR00 106 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 INPP5EQ9NRR6 644 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 CALYQ9NYX4 217 aa12.16□□□□□ -0.46
LIMS3-203ENST00000480744 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
LIMS3-203ENST00000480744 A0A087X0M5 115 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 A0A1B0GX30 115 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 LY6LH3BQJ8 138 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 GABRPO00591 440 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 ALX3O95076 343 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 LOXL3P58215 753 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 RAB40BQ12829 278 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 RSU1Q15404 277 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 TCTEX1D4Q5JR98 221 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 FOXB2Q5VYV0 432 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 LAIR2Q6ISS4 152 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 C10orf99Q6UWK7 81 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 ZNF565Q8N9K5 539 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 OR51A2Q8NGJ7 313 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 OR51T1Q8NGJ9 327 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 OR13A1Q8NGR1 328 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 TAS2R4Q9NYW5 299 aa12.15□□□□□ -0.46
LIMS3-203ENST00000480744 AMMECR1Q9Y4X0 333 aaPredicted RBP12.15□□□□□ -0.46
LIMS3-203ENST00000480744 TRAV24A0A0B4J272 114 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 OOSP1A8MZH6 123 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 M0QZK8 103 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 HTR3BO95264 441 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 AMY1AP04745 511 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 AMY2AP04746 511 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 FAM106CPP0CH98 169 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 C21orf33P30042 268 aaPredicted RBP12.14□□□□□ -0.47
LIMS3-203ENST00000480744 CAPGP40121 348 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 GNG10P50151 68 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 GTF2A1P52655 376 aaPredicted RBP12.14□□□□□ -0.47
LIMS3-203ENST00000480744 AQP4P55087 323 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 PIGYQ3MUY2 71 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 ELP2Q6IA86 826 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 DHRSXQ8N5I4 330 aa12.14□□□□□ -0.47
LIMS3-203ENST00000480744 PXT1Q8NFP0 134 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms