RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 RAB9AP51151 201 aa8.48□□□□□ -1.05
VEGFA-212ENST00000480614 ZBTB34Q8NCN2 500 aa8.48□□□□□ -1.05
VEGFA-212ENST00000480614 KLK11Q9UBX7 282 aa8.48□□□□□ -1.05
VEGFA-212ENST00000480614 C9orf170A2RU37 121 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 WDR74Q6RFH5 385 aaPredicted RBP8.47□□□□□ -1.05
VEGFA-212ENST00000480614 GNRHR2Q96P88 292 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 SF3B5Q9BWJ5 86 aaKnown RBP8.47□□□□□ -1.05
VEGFA-212ENST00000480614 A0A1W2PNV4 684 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 ACTL6AO96019 429 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 IGSF11Q5DX21 431 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 SLC25A30Q5SVS4 291 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 MAMSTRQ6ZN01 415 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 SNRNP40Q96DI7 357 aaKnown RBP8.47□□□□□ -1.05
VEGFA-212ENST00000480614 C11orf94C9JXX5 98 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 CXorf1O96002 111 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 OR4A8P0C604 315 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 TMIGD3P0DMS9 266 aaPredicted RBP8.47□□□□□ -1.05
VEGFA-212ENST00000480614 OR3A4PP47883 348 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 CTF1Q16619 201 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 Q6ZN92 141 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 LTB4R2Q9NPC1 389 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 SKP2Q13309 424 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 ACER2Q5QJU3 275 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 SLIRPQ9GZT3 109 aaKnown RBP8.47□□□□□ -1.05
VEGFA-212ENST00000480614 M0R2Z0 102 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 SEMG1P04279 462 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 CA6P23280 308 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 P2RY1P47900 373 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 LIMK1P53667 647 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 MIEN1Q9BRT3 115 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 RBFOX3A6NFN3 312 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 CORTO00230 105 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 GALNSP34059 522 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 AMMECR1LQ6DCA0 310 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 OR5M9Q8NGP3 310 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 SLC25A22Q9H936 323 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 FXYD1O00168 92 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 GNG7O60262 68 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 NQO2P16083 231 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 OR1L8Q8NGR8 309 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 ZFPL1O95159 310 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 ETHE1O95571 254 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 PRSS1P07477 247 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 VDAC1P21796 283 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 TMEM37Q8WXS4 190 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 GPX7Q96SL4 187 aaPredicted RBP8.47□□□□□ -1.05
VEGFA-212ENST00000480614 SAP30LQ9HAJ7 183 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 CES1P1Q9UKY3 287 aa8.47□□□□□ -1.05
VEGFA-212ENST00000480614 A0A1B0GU03 582 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 HELTA6NFD8 242 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 PPP1R1AQ13522 171 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 ANKRD37Q7Z713 158 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 CCL4L1Q8NHW4 92 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 PLEKHB1Q9UF11 243 aaPredicted RBP8.46□□□□□ -1.05
VEGFA-212ENST00000480614 MRPS16Q9Y3D3 137 aaKnown RBP8.46□□□□□ -1.05
VEGFA-212ENST00000480614 OR10D4PQ8NGN7 298 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 WNT16Q9UBV4 365 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 H3BP45 60 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 AGERQ15109 404 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 ZNF770Q6IQ21 691 aaPredicted RBP8.46□□□□□ -1.05
VEGFA-212ENST00000480614 CCL17Q92583 94 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 MFSD2BA6NFX1 497 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 PLPP3O14495 311 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 G6PCP35575 357 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 OR10D3Q8NH80 312 aa8.46□□□□□ -1.05
VEGFA-212ENST00000480614 MT-CO3P00414 261 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 DLX1P56177 255 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 COL19A1Q14993 1142 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 FAM219AQ8IW50 185 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 OR2I1PQ8NGU4 316 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 ZFYVE26Q68DK2 2539 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 ZNF117Q03924 483 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 PRSS54Q6PEW0 395 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 IGLV3-16A0A075B6K0 115 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 LSM6P62312 80 aaKnown RBP8.46□□□□□ -1.06
VEGFA-212ENST00000480614 LRP11Q86VZ4 500 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 TMEM218A2RU14 115 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 CD40P25942 277 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 HIST3H3Q16695 136 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 ING1Q9UK53 422 aaPredicted RBP8.46□□□□□ -1.06
VEGFA-212ENST00000480614 MUC6Q6W4X9 2439 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.46□□□□□ -1.06
VEGFA-212ENST00000480614 MRPS11P82912 194 aaKnown RBP8.46□□□□□ -1.06
VEGFA-212ENST00000480614 FOXC1Q12948 553 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 SYT8Q8NBV8 401 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 OR1L6Q8NGR2 347 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 EXOGQ9Y2C4 368 aaKnown RBP8.46□□□□□ -1.06
VEGFA-212ENST00000480614 SLC37A1P57057 533 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 RAC3P60763 192 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 WDR34Q96EX3 536 aa8.46□□□□□ -1.06
VEGFA-212ENST00000480614 FAM90A27PA6NNH2 459 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 RER1O15258 196 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 OR5AC1P0C628 307 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 ZNF32P17041 273 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 MUC15Q8N387 334 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 TMEM210A6NLX4 147 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 C21orf140B9A014 251 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 M0R3E3 92 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 TGIF2LXQ8IUE1 241 aa8.45□□□□□ -1.06
VEGFA-212ENST00000480614 MUC20Q8N307 709 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms