RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 PRUNE2Q8WUY3 3088 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 TRBV6-6A0A0A6YYG2 114 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 HSPA12AO43301 675 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 LAMTOR5O43504 91 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 ARR3P36575 388 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 HAAOP46952 286 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 LHX2P50458 406 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 BAXQ07812 192 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 HABP2Q14520 560 aaPredicted RBP21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 OR1J1Q8NGS3 322 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 SFT2D1Q8WV19 159 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 LHX6Q9UPM6 363 aa21.13■□□□□ 0.97
SYNGAP1-206ENST00000479510 ZNF724A8MTY0 619 aa21.12■□□□□ 0.97
SYNGAP1-206ENST00000479510 TRAPPC2LH3BP13 241 aa21.12■□□□□ 0.97
SYNGAP1-206ENST00000479510 VDAC1P21796 283 aa21.12■□□□□ 0.97
SYNGAP1-206ENST00000479510 NMSQ5H8A3 153 aa21.12■□□□□ 0.97
SYNGAP1-206ENST00000479510 SPIN3Q5JUX0 258 aa21.12■□□□□ 0.97
SYNGAP1-206ENST00000479510 ZNF703Q9H7S9 590 aaPredicted RBP21.12■□□□□ 0.97
SYNGAP1-206ENST00000479510 KCNJ16Q9NPI9 418 aa21.12■□□□□ 0.97
SYNGAP1-206ENST00000479510 SLC22A20A6NK97 555 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 SYNGR4O95473 234 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 FHITP49789 147 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 RAB1AP62820 205 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 VAMP2P63027 116 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 ID3Q02535 119 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 ZNF818PQ6ZRF7 136 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 CMTM1Q8IZ96 169 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 OR2M7Q8NG81 312 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 OR5D13Q8NGL4 314 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 FGF23Q9GZV9 251 aaPredicted RBP21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 VCANP13611 3396 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 SHANK1Q9Y566 2161 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 IGSF23A1L1A6 192 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 GPM6AP51674 278 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 CLDN18P56856 261 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 TIPARPQ7Z3E1 657 aaKnown RBP21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 GAPTQ8N292 157 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 ZNF561Q8N587 486 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 TMEM252Q8N6L7 170 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 C12orf57Q99622 126 aa21.11■□□□□ 0.97
SYNGAP1-206ENST00000479510 C5orf49A4QMS7 147 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 FAM24AA6NFZ4 105 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 C19orf67A6NJJ6 358 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 H0Y980 276 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 IGHV3-9P01782 118 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 ZNF44P15621 663 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 S100A12P80511 92 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 TMEM182Q6ZP80 229 aaPredicted RBP21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 FAM213BQ8TBF2 198 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 GNPNAT1Q96EK6 184 aaPredicted RBP21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 HIST1H2AAQ96QV6 131 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 DDA1Q9BW61 102 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 STRADBQ9C0K7 418 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 MTCH1Q9NZJ7 389 aa21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 TNRC6AQ8NDV7 1962 aaKnown RBP21.1■□□□□ 0.97
SYNGAP1-206ENST00000479510 ZNF732B4DXR9 585 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 WNT2P09544 360 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 SCTP09683 121 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 S100GP29377 79 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 POLR2GP62487 172 aaKnown RBP eCLIP21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 HIPK2Q9H2X6 1198 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 UNKLQ9H9P5 680 aaKnown RBP21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 TRIOBPQ9H2D6 2365 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 M0R036 132 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 ADAM20O43506 726 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 C1QL1O75973 258 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 HOXB1P14653 301 aaPredicted RBP21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 HERPUD1Q15011 391 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 OR8G1Q15617 311 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 OR2G3Q8NGZ4 309 aa21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 LILRB1Q8NHL6 650 aaPredicted RBP21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 THOC3Q96J01 351 aaKnown RBP21.09■□□□□ 0.97
SYNGAP1-206ENST00000479510 SNRNP70P08621 437 aaKnown RBP21.08■□□□□ 0.97
SYNGAP1-206ENST00000479510 SLC25A6P12236 298 aa21.08■□□□□ 0.97
SYNGAP1-206ENST00000479510 AGAP20933 346 aa21.08■□□□□ 0.97
SYNGAP1-206ENST00000479510 ATP6V0CP27449 155 aa21.08■□□□□ 0.97
SYNGAP1-206ENST00000479510 MEOX2P50222 304 aa21.08■□□□□ 0.97
SYNGAP1-206ENST00000479510 CLINT1Q14677 625 aa21.08■□□□□ 0.97
SYNGAP1-206ENST00000479510 SPINK14Q6IE38 97 aa21.08■□□□□ 0.97
SYNGAP1-206ENST00000479510 ETV3LQ6ZN32 361 aa21.08■□□□□ 0.97
SYNGAP1-206ENST00000479510 ARID1AO14497 2285 aa21.08■□□□□ 0.96
SYNGAP1-206ENST00000479510 NEURL1O76050 574 aa21.08■□□□□ 0.96
SYNGAP1-206ENST00000479510 CEACAM1P13688 526 aa21.08■□□□□ 0.96
SYNGAP1-206ENST00000479510 C2CD4CQ8TF44 421 aa21.08■□□□□ 0.96
SYNGAP1-206ENST00000479510 SIGLEC12Q96PQ1 595 aa21.08■□□□□ 0.96
SYNGAP1-206ENST00000479510 SPRY4Q9C004 299 aa21.08■□□□□ 0.96
SYNGAP1-206ENST00000479510 PRDM6Q9NQX0 595 aa21.08■□□□□ 0.96
SYNGAP1-206ENST00000479510 ABI3Q9P2A4 366 aa21.08■□□□□ 0.96
SYNGAP1-206ENST00000479510 OR5B21A6NL26 309 aa21.07■□□□□ 0.96
SYNGAP1-206ENST00000479510 PROB1E7EW31 1015 aa21.07■□□□□ 0.96
SYNGAP1-206ENST00000479510 SSSCA1O60232 199 aa21.07■□□□□ 0.96
SYNGAP1-206ENST00000479510 HLA-HP01893 362 aa21.07■□□□□ 0.96
SYNGAP1-206ENST00000479510 CCNOP22674 350 aa21.07■□□□□ 0.96
SYNGAP1-206ENST00000479510 NOVA1P51513 510 aaKnown RBP21.07■□□□□ 0.96
SYNGAP1-206ENST00000479510 DPPA3Q6W0C5 159 aa21.07■□□□□ 0.96
SYNGAP1-206ENST00000479510 TUSC5Q8IXB3 177 aa21.07■□□□□ 0.96
SYNGAP1-206ENST00000479510 ZFP82Q8N141 532 aa21.07■□□□□ 0.96
SYNGAP1-206ENST00000479510 MALSU1Q96EH3 234 aa21.07■□□□□ 0.96
SYNGAP1-206ENST00000479510 POM121L2Q96KW2 1035 aa21.07■□□□□ 0.96
SYNGAP1-206ENST00000479510 MPC1Q9Y5U8 109 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms