RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 Q6P435 159 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 ACP7Q6ZNF0 438 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 Q6ZTK2 550 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 FAM90A1Q86YD7 464 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 TGIF2LYQ8IUE0 185 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 Q8N402 240 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 CHST4Q8NCG5 386 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 OR11L1Q8NGX0 322 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 C15orf40Q8WUR7 153 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 ZFAND2BQ8WV99 257 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 IGFBPL1Q8WX77 278 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 YIPF5Q969M3 257 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 ARHGAP5-AS1Q96IT6 56 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 CACNG6Q9BXT2 260 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 PECRQ9BY49 303 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 WDR13Q9H1Z4 485 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 ZMAT4Q9H898 229 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 PLEKHF2Q9H8W4 249 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 DECR2Q9NUI1 292 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 DCAF16Q9NXF7 216 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 RASL12Q9NYN1 266 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 RNF7Q9UBF6 113 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 HSF4Q9ULV5 492 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 PPP1R3CQ9UQK1 317 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 PLEKHA6Q9Y2H5 1048 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 MRPS7Q9Y2R9 242 aaKnown RBP5.57□□□□□ -1.52
USP48-208ENST00000479177 KCNK7Q9Y2U2 307 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 CACNG2Q9Y698 323 aa5.57□□□□□ -1.52
USP48-208ENST00000479177 SETXQ7Z333 2677 aaKnown RBP5.57□□□□□ -1.52
USP48-208ENST00000479177 NOTCH2Q04721 2471 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 TRAV24A0A0B4J272 114 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 A0A1W2PQ09 198 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 MEIOCA2RUB1 952 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 SERPINE3A8MV23 424 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 GABARAPH6UMI1 98 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 IFNL4K9M1U5 179 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 OVOL3O00110 214 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 TPD52L2O43399 206 aaKnown RBP5.56□□□□□ -1.52
USP48-208ENST00000479177 LANCL1O43813 399 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 SSX5O60225 188 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 CA11O75493 328 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 HAND1O96004 215 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 CYB5R3P00387 301 aaPredicted RBP5.56□□□□□ -1.52
USP48-208ENST00000479177 LPLP06858 475 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 CD3GP09693 182 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 FUT3P21217 361 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 GLRA1P23415 457 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 DUSP1P28562 367 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 ARL6IP1Q15041 203 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 PDCD1Q15116 288 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 BAK1Q16611 211 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 PNLIPRP3Q17RR3 467 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 CDNFQ49AH0 187 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 HACD4Q5VWC8 232 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 TRIQKQ629K1 86 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 OLFML2AQ68BL7 652 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 SP5Q6BEB4 398 aaPredicted RBP5.56□□□□□ -1.52
USP48-208ENST00000479177 C16orf87Q6PH81 154 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 FIP1L1Q6UN15 594 aaKnown RBP5.56□□□□□ -1.52
USP48-208ENST00000479177 C6orf201Q7Z4U5 140 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 LYSMD2Q8IV50 215 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 OR8H2Q8N162 312 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 OR52I2Q8NH67 350 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 GPX8Q8TED1 209 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 NUDCD2Q8WVJ2 157 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 SEH1LQ96EE3 360 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 C8orf49Q96NF6 230 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 NEDD4LQ96PU5 975 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 VRK1Q99986 396 aaPredicted RBP5.56□□□□□ -1.52
USP48-208ENST00000479177 SULT4A1Q9BR01 284 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 ZMAT3Q9HA38 289 aaKnown RBP5.56□□□□□ -1.52
USP48-208ENST00000479177 SCPEP1Q9HB40 452 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 SPACA1Q9HBV2 294 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 ABCB10Q9NRK6 738 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 TMEM106BQ9NUM4 274 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 NLKQ9UBE8 527 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 ZNF222Q9UK12 451 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 ELF5Q9UKW6 265 aaPredicted RBP5.56□□□□□ -1.52
USP48-208ENST00000479177 ANAPC10Q9UM13 185 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 LAMP3Q9UQV4 416 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 RBMX2Q9Y388 322 aaKnown RBP5.56□□□□□ -1.52
USP48-208ENST00000479177 WIPI2Q9Y4P8 454 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 NPTNQ9Y639 398 aa5.56□□□□□ -1.52
USP48-208ENST00000479177 ASH1LQ9NR48 2969 aaKnown RBP5.55□□□□□ -1.52
USP48-208ENST00000479177 IGKV1D-17A0A075B6S4 117 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 IGHV3OR15-7A0A075B7D8 119 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 IGHV1-69-2A0A0G2JMI3 117 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 OOEPA6NGQ2 149 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 LRRC30A6NM36 301 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 TMEM178BH3BS89 294 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 H3BUI4 141 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 LGALS8O00214 317 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 SIRPB1O00241 398 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 SULT1C2O00338 296 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 SLC33A1O00400 549 aaPredicted RBP5.55□□□□□ -1.52
USP48-208ENST00000479177 SH2D1BO14796 132 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 RP2O75695 350 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 OR2H2O95918 312 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 TFF1P04155 84 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms