RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 PCGF1Q9BSM1 259 aa22■■□□□ 1.11
CCM2-211ENST00000478582 DPCDQ9BVM2 203 aaPredicted RBP22■■□□□ 1.11
CCM2-211ENST00000478582 TM2D1Q9BX74 207 aa22■■□□□ 1.11
CCM2-211ENST00000478582 NCOR1P1Q9H4R4 102 aa22■■□□□ 1.11
CCM2-211ENST00000478582 UNKLQ9H9P5 680 aaKnown RBP22■■□□□ 1.11
CCM2-211ENST00000478582 NOTOA8MTQ0 251 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 AIPO00170 330 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 SDC2P34741 201 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 SRSF2Q01130 221 aaKnown RBP21.99■■□□□ 1.11
CCM2-211ENST00000478582 BLMHQ13867 455 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 ZNF273Q14593 569 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 C2orf76Q3KRA6 126 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 HES5Q5TA89 166 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 OR51D1Q8NGF3 324 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 COQ2Q96H96 371 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 FUNDC2Q9BWH2 189 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 TMEM59Q9BXS4 323 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 OCEL1Q9H607 264 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 LINC00312Q9Y6C7 94 aa21.99■■□□□ 1.11
CCM2-211ENST00000478582 LDLRAD4O15165 306 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 GLAP06280 429 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 DLX6P56179 175 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 CLDN12P56749 244 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 AESQ08117 197 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 METAP1DQ6UB28 335 aaPredicted RBP21.98■■□□□ 1.11
CCM2-211ENST00000478582 TCF23Q7RTU1 214 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 BPIFB2Q8N4F0 458 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 C11orf42Q8N5U0 333 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 TPRX1Q8N7U7 411 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 CORO2AQ92828 525 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 BARHL1Q9BZE3 327 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 KCNK15Q9H427 330 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 METTL8Q9H825 291 aaKnown RBP21.98■■□□□ 1.11
CCM2-211ENST00000478582 NUP50Q9UKX7 468 aa21.98■■□□□ 1.11
CCM2-211ENST00000478582 PRTN3P24158 256 aa21.97■■□□□ 1.11
CCM2-211ENST00000478582 GLIPR1P48060 266 aa21.97■■□□□ 1.11
CCM2-211ENST00000478582 ATXN7L3Q14CW9 347 aaPredicted RBP21.97■■□□□ 1.11
CCM2-211ENST00000478582 KRBOX4Q5JUW0 171 aa21.97■■□□□ 1.11
CCM2-211ENST00000478582 ATAD3CQ5T2N8 411 aa21.97■■□□□ 1.11
CCM2-211ENST00000478582 SIGIRRQ6IA17 410 aa21.97■■□□□ 1.11
CCM2-211ENST00000478582 VMO1Q7Z5L0 202 aa21.97■■□□□ 1.11
CCM2-211ENST00000478582 A0A0A6YYJ9 748 aa21.96■■□□□ 1.11
CCM2-211ENST00000478582 ODAMA1E959 279 aa21.96■■□□□ 1.11
CCM2-211ENST00000478582 C17orf98A8MV24 154 aa21.96■■□□□ 1.11
CCM2-211ENST00000478582 HSPB6O14558 160 aa21.96■■□□□ 1.11
CCM2-211ENST00000478582 RBP4P02753 201 aa21.96■■□□□ 1.11
CCM2-211ENST00000478582 ZNF728P0DKX0 622 aa21.96■■□□□ 1.11
CCM2-211ENST00000478582 CCL3L1P16619 93 aa21.96■■□□□ 1.11
CCM2-211ENST00000478582 FUT3P21217 361 aa21.96■■□□□ 1.11
CCM2-211ENST00000478582 BPIFB3P59826 476 aa21.96■■□□□ 1.11
CCM2-211ENST00000478582 RSBN1Q5VWQ0 802 aaPredicted RBP21.96■■□□□ 1.11
CCM2-211ENST00000478582 PLPPR1Q8TBJ4 325 aa21.96■■□□□ 1.11
CCM2-211ENST00000478582 URM1Q9BTM9 101 aaKnown RBP21.96■■□□□ 1.11
CCM2-211ENST00000478582 LPAR5Q9H1C0 372 aa21.96■■□□□ 1.11
CCM2-211ENST00000478582 UBE2J1Q9Y385 318 aaPredicted RBP21.96■■□□□ 1.11
CCM2-211ENST00000478582 hCG_1809904A0A1W2PP81 198 aa21.95■■□□□ 1.1
CCM2-211ENST00000478582 A0A1W2PPE2 198 aa21.95■■□□□ 1.1
CCM2-211ENST00000478582 A0A1W2PR64 198 aa21.95■■□□□ 1.1
CCM2-211ENST00000478582 A0A1W2PRV1 198 aa21.95■■□□□ 1.1
CCM2-211ENST00000478582 IGHV4-38-2P0DP08 117 aa21.95■■□□□ 1.1
CCM2-211ENST00000478582 EPHA1P21709 976 aa21.95■■□□□ 1.1
CCM2-211ENST00000478582 RBM39Q14498 530 aaKnown RBP21.95■■□□□ 1.1
CCM2-211ENST00000478582 RAB12Q6IQ22 244 aa21.95■■□□□ 1.1
CCM2-211ENST00000478582 FAM89BQ8N5H3 189 aa21.95■■□□□ 1.1
CCM2-211ENST00000478582 TNFRSF14Q92956 283 aa21.95■■□□□ 1.1
CCM2-211ENST00000478582 TRAV40A0A0B4J280 105 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 CENPVL3A0A0U1RRI6 287 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 MCRIP1C9JLW8 97 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 PDCD6O75340 191 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 CLEC2LP0C7M8 214 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 MXD1Q05195 221 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 SLC35E4Q6ICL7 350 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 SFXN4Q6P4A7 337 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 ANKRD13BQ86YJ7 626 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 ZNF714Q96N38 554 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 C19orf24Q9BVV8 132 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 LIN7BQ9HAP6 207 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 SIRT7Q9NRC8 400 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 TAS2R3Q9NYW6 316 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 OR6C3Q9NZP0 311 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 RAB22AQ9UL26 194 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 PEX16Q9Y5Y5 336 aa21.94■■□□□ 1.1
CCM2-211ENST00000478582 TRGV10A0A0A0MS01 117 aa21.93■■□□□ 1.1
CCM2-211ENST00000478582 TMEM272A0A1B0GTI8 110 aa21.93■■□□□ 1.1
CCM2-211ENST00000478582 SMIM30A4D0T7 59 aa21.93■■□□□ 1.1
CCM2-211ENST00000478582 SLC2A2P11168 524 aaPredicted RBP21.93■■□□□ 1.1
CCM2-211ENST00000478582 GPR157Q5UAW9 335 aa21.93■■□□□ 1.1
CCM2-211ENST00000478582 BRICD5Q6PL45 260 aa21.93■■□□□ 1.1
CCM2-211ENST00000478582 C9orf139Q6ZV77 190 aa21.93■■□□□ 1.1
CCM2-211ENST00000478582 ZNF418Q8TF45 676 aaPredicted RBP21.93■■□□□ 1.1
CCM2-211ENST00000478582 LHX4Q969G2 390 aa21.93■■□□□ 1.1
CCM2-211ENST00000478582 PTX4Q96A99 478 aa21.93■■□□□ 1.1
CCM2-211ENST00000478582 NICN1Q9BSH3 213 aa21.93■■□□□ 1.1
CCM2-211ENST00000478582 KIF25Q9UIL4 384 aa21.93■■□□□ 1.1
CCM2-211ENST00000478582 A0A0A6YYD4 124 aa21.92■■□□□ 1.1
CCM2-211ENST00000478582 TMEM127O75204 238 aa21.92■■□□□ 1.1
CCM2-211ENST00000478582 CHATP28329 748 aa21.92■■□□□ 1.1
CCM2-211ENST00000478582 TGFBR1P36897 503 aa21.92■■□□□ 1.1
CCM2-211ENST00000478582 LSM3P62310 102 aaKnown RBP21.92■■□□□ 1.1
CCM2-211ENST00000478582 TUSC1Q2TAM9 212 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms