RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 C1orf147Q96MC9 270 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF714Q96N38 554 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 DUX5Q96PT3 197 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 GFI1Q99684 422 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 DPCDQ9BVM2 203 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-215ENST00000478531 SUCNR1Q9BXA5 334 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 CST11Q9H112 138 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 STUB1Q9UNE7 303 aa5.66□□□□□ -1.5
BRCA1-215ENST00000478531 TRGV10A0A0A0MS01 117 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 IGHV1-69DA0A0B4J2H0 117 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 TRDV1A0A1B0GX56 115 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 hCG_1809904A0A1W2PP81 198 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 A0A1W2PPE2 198 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 A0A1W2PR64 198 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 A0A1W2PRV1 198 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 ODAMA1E959 279 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 RNASEK-C17orf49H0YIS7 233 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 IGHV1-69P01742 117 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 UBBP0CG47 229 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 ZNF728P0DKX0 622 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 CD36P16671 472 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 LMO1P25800 156 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 CLDN12P56749 244 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 OR10A3P58181 314 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 BPIFB3P59826 476 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 GUCA2AQ02747 115 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 MEF2CQ06413 473 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-215ENST00000478531 RAB11BQ15907 218 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 NHLRC3Q5JS37 347 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 HES5Q5TA89 166 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 NCR3LG1Q68D85 454 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 CD200R1LQ6Q8B3 271 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 RBMS3Q6XE24 437 aaKnown RBP5.65□□□□□ -1.51
BRCA1-215ENST00000478531 LINC00596Q86U02 117 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 Q8NFD4 153 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 OR6M1Q8NGM8 313 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 CHCHD6Q9BRQ6 235 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 TMEM59Q9BXS4 323 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 OR51E2Q9H255 320 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 ZNF696Q9H7X3 374 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 SEBOXQ9HB31 216 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-215ENST00000478531 TXNL4BQ9NX01 149 aaKnown RBP5.65□□□□□ -1.51
BRCA1-215ENST00000478531 SSR3Q9UNL2 185 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 LINC00312Q9Y6C7 94 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 DNHD1Q96M86 4753 aa5.65□□□□□ -1.51
BRCA1-215ENST00000478531 MEIKINA0A087WXM9 373 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 SHISA3A0PJX4 238 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 MEIOCA2RUB1 952 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 FUOMA2VDF0 154 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 FAM172BPA6NC97 362 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 SLC17A2O00624 439 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 SLC22A1O15245 554 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 CLPXO76031 633 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 VENTXO95231 258 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 CSN2P05814 226 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 VSIG8P0DPA2 414 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 ARSBP15848 533 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 GADD45AP24522 165 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 UNC119Q13432 240 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 MPV17LQ2QL34 196 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 DEFB112Q30KQ8 113 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 NKAPLQ5M9Q1 402 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 C1orf100Q5SVJ3 147 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 SYT6Q5T7P8 510 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-215ENST00000478531 PRAMEF5Q5TYX0 476 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 PLPPR1Q8TBJ4 325 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 DYRK2Q92630 601 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 TNFRSF14Q92956 283 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 Q96M66 194 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 DMRTB1Q96MA1 342 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 ZNF48Q96MX3 618 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-215ENST00000478531 GAL3ST2Q9H3Q3 398 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 RNF167Q9H6Y7 350 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 TNFRSF19Q9NS68 423 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 KIF25Q9UIL4 384 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 V9GY05 133 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 TRAV1-2A0A0B4J238 106 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 TRAV39A0A0B4J263 110 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 A0A0U1RQK1 487 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 DNAJC9-AS1A6NH13 148 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 PDCD5O14737 125 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 NPFFO15130 113 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 IGHV1-8P0DP01 117 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 RAB3BP20337 219 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 OMGP23515 440 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 PRTN3P24158 256 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 ERP29P30040 261 aaKnown RBP5.64□□□□□ -1.51
BRCA1-215ENST00000478531 SAA4P35542 130 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 DLX6P56179 175 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 HILS1P60008 231 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 MXD1Q05195 221 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 BAMBIQ13145 260 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 RSBN1Q5VWQ0 802 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-215ENST00000478531 RAB12Q6IQ22 244 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 C1orf122Q6ZSJ8 110 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 C9orf139Q6ZV77 190 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 OR51D1Q8NGF3 324 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 OR13A1Q8NGR1 328 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 KCNG3Q8TAE7 436 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 MRGPRDQ8TDS7 321 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms