RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 BTN2A1Q7KYR7 527 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 GLCCI1Q86VQ1 547 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 SAMD12Q8N8I0 201 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 OR5D13Q8NGL4 314 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 ACOT12Q8WYK0 555 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 SHARPINQ9H0F6 387 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 ING3Q9NXR8 418 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 PEX16Q9Y5Y5 336 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 LOC105371242A0A075B767 164 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 TRBV23-1A0A0A0MS06 115 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 IGHV2-70DA0A0C4DH43 119 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 A0A1W2PQ09 198 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 SOCS1O15524 211 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 ENSAO43768 121 aaKnown RBP12.67□□□□□ -0.38
SEC13-215ENST00000477547 FUT3P21217 361 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 KCNJ3P48549 501 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 P2RX3P56373 397 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 DYNC1I2Q13409 638 aaKnown RBP12.67□□□□□ -0.38
SEC13-215ENST00000477547 MOGAT2Q3SYC2 334 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 CD276Q5ZPR3 534 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 CYB5R2Q6BCY4 276 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 RTN4RL2Q86UN3 420 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 FAM185AQ8N0U4 392 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 BPIFB2Q8N4F0 458 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 FAM89BQ8N5H3 189 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 TPRX1Q8N7U7 411 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 PLPPR1Q8TBJ4 325 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 DCTN5Q9BTE1 182 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 C19orf12Q9NSK7 152 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 COMMD3Q9UBI1 195 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 RPUSD1Q9UJJ7 312 aaKnown RBP12.67□□□□□ -0.38
SEC13-215ENST00000477547 ANK3Q12955 4377 aaKnown RBP12.67□□□□□ -0.38
SEC13-215ENST00000477547 ZANQ9Y493 2812 aa12.67□□□□□ -0.38
SEC13-215ENST00000477547 HIVEP2P31629 2446 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 TRAV20A0A0B4J274 112 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 FOXI3A8MTJ6 420 aaPredicted RBP12.66□□□□□ -0.38
SEC13-215ENST00000477547 MCRIP1C9JLW8 97 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 SCGNO76038 276 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 ECDO95905 644 aaPredicted RBP12.66□□□□□ -0.38
SEC13-215ENST00000477547 RPL31P62899 125 aaKnown RBP12.66□□□□□ -0.38
SEC13-215ENST00000477547 KRTAP1-1Q07627 177 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 AESQ08117 197 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 RBM39Q14498 530 aaKnown RBP12.66□□□□□ -0.38
SEC13-215ENST00000477547 KRBOX4Q5JUW0 171 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 MZT2AQ6P582 158 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 BRICD5Q6PL45 260 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 C6orf201Q7Z4U5 140 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 OR4M1Q8NGD0 313 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 DYRK2Q92630 601 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 TMEM186Q96B77 213 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 PHF21AQ96BD5 680 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 DGCR14Q96DF8 476 aaKnown RBP12.66□□□□□ -0.38
SEC13-215ENST00000477547 COQ2Q96H96 371 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 CYYR1Q96J86 154 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 NUDT16L1Q9BRJ7 211 aaKnown RBP12.66□□□□□ -0.38
SEC13-215ENST00000477547 POLR3KQ9Y2Y1 108 aaPredicted RBP12.66□□□□□ -0.38
SEC13-215ENST00000477547 NBEAL1Q6ZS30 2694 aa12.66□□□□□ -0.38
SEC13-215ENST00000477547 UBE2QL1A1L167 161 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 FUOMA2VDF0 154 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 RAB27BO00194 218 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 TGFAP01135 160 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 DVL1P1P54792 670 aaPredicted RBP12.65□□□□□ -0.38
SEC13-215ENST00000477547 C11orf91Q3C1V1 193 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 RSBN1Q5VWQ0 802 aaPredicted RBP12.65□□□□□ -0.38
SEC13-215ENST00000477547 BTNL3Q6UXE8 466 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 OR10R2Q8NGX6 335 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 C8orf46Q8TAG6 207 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 DACT3Q96B18 629 aaPredicted RBP12.65□□□□□ -0.38
SEC13-215ENST00000477547 RAB3CQ96E17 227 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 ARHGAP5-AS1Q96IT6 56 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 SULT4A1Q9BR01 284 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 SLIRPQ9GZT3 109 aaKnown RBP12.65□□□□□ -0.38
SEC13-215ENST00000477547 BATF3Q9NR55 127 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 PLEKHJ1Q9NW61 149 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 HIF1ANQ9NWT6 349 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 ETAA1Q9NY74 926 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 LPAR3Q9UBY5 353 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 KIF25Q9UIL4 384 aa12.65□□□□□ -0.38
SEC13-215ENST00000477547 A0A075B6Q4 140 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 A0A0G2JMP0 313 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 A0A0X1KG70 313 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 TMEM30CPA0ZSE6 113 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 ODAMA1E959 279 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 MEX3AA1L020 520 aaKnown RBP12.64□□□□□ -0.39
SEC13-215ENST00000477547 A6NHS1 94 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 CD5LO43866 347 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 HPGDSO60760 199 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 GLAP06280 429 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 EIF4EP06730 217 aaKnown RBP12.64□□□□□ -0.39
SEC13-215ENST00000477547 HIST1H1DP16402 221 aaKnown RBP12.64□□□□□ -0.39
SEC13-215ENST00000477547 ERP29P30040 261 aaKnown RBP12.64□□□□□ -0.39
SEC13-215ENST00000477547 GLP1RP43220 463 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 GLIPR1P48060 266 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 PAX2Q02962 417 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 PLAC9Q5JTB6 97 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 DCAF12L2Q5VW00 463 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 TCF23Q7RTU1 214 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 TRAPPC6BQ86SZ2 158 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 CMTM4Q8IZR5 234 aa12.64□□□□□ -0.39
SEC13-215ENST00000477547 OR4M2Q8NGB6 313 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms