RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 STRCP1A6NGW2 1772 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 WNT3P56703 355 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 IGHV5-10-1A0A0J9YXX1 117 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 DUXBA0A1W2PPF3 345 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 PLPP2O43688 288 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 MPC2O95563 127 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 HIKESHIQ53FT3 197 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 LRP11Q86VZ4 500 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 Q8WTZ3 238 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 HLA-GP17693 338 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 SELENOPP49908 381 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 RNF165Q6ZSG1 346 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 ASCL5Q7RTU5 278 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 OR1L6Q8NGR2 347 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 NPAS1Q99742 590 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 ZNF665Q9H7R5 613 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 TRDCB7Z8K6 153 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 ATXN7O15265 892 aaPredicted RBP16.36■□□□□ 0.21
VARS2-209ENST00000477288 OR8I2Q8N0Y5 310 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 D2HGDHQ8N465 521 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 HIST3H3Q16695 136 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 PCGF1Q9BSM1 259 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 INSIG2Q9Y5U4 225 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 TBX19O60806 448 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 INHBBP09529 407 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 COL8A1P27658 744 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 FOXB2Q5VYV0 432 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 BET1LQ9NYM9 111 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 TMSB15BA0A087X1C1 80 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 MAP1LC3CQ9BXW4 147 aa16.36■□□□□ 0.21
VARS2-209ENST00000477288 ASPDHA6ND91 283 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 ID4P47928 161 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 THSD4Q6ZMP0 1018 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 LPAR5Q9H1C0 372 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 EXOGQ9Y2C4 368 aaKnown RBP16.35■□□□□ 0.21
VARS2-209ENST00000477288 SFTPCP11686 197 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 HLA-DRB3P79483 266 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 INPP5JQ15735 1006 aaPredicted RBP16.35■□□□□ 0.21
VARS2-209ENST00000477288 OR8D4Q8NGM9 314 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 TRBV23-1A0A0A0MS06 115 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 PMELP40967 661 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 KIR2DL1P43626 348 aaPredicted RBP16.35■□□□□ 0.21
VARS2-209ENST00000477288 KIR2DL2P43627 348 aaPredicted RBP16.35■□□□□ 0.21
VARS2-209ENST00000477288 OR4X1Q8NH49 305 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 MAP6Q96JE9 813 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 CDK5RAP2Q96SN8 1893 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 CCL3P10147 92 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 PAFAH1B2P68402 229 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 ABHD3Q8WU67 409 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 ZNF764Q96H86 408 aaPredicted RBP16.35■□□□□ 0.21
VARS2-209ENST00000477288 COX14Q96I36 57 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 STARD10Q9Y365 291 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 C16orf97H3BN30 126 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 TCTAP57738 103 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 RIGQ13278 110 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 MRM1Q6IN84 353 aaKnown RBP16.35■□□□□ 0.21
VARS2-209ENST00000477288 OR8A1Q8NGG7 326 aa16.35■□□□□ 0.21
VARS2-209ENST00000477288 C11orf94C9JXX5 98 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 PRF1P14222 555 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 GCSHP23434 173 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 B2MP61769 119 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 MRPL54Q6P161 138 aaKnown RBP16.34■□□□□ 0.21
VARS2-209ENST00000477288 FAM222BQ8WU58 562 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 SF3B5Q9BWJ5 86 aaKnown RBP16.34■□□□□ 0.21
VARS2-209ENST00000477288 IGSF23A1L1A6 192 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 CST2P09228 141 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 CD82P27701 267 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 HLA-DRB5Q30154 266 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 PRSS54Q6PEW0 395 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 MS4A7Q9GZW8 240 aaPredicted RBP16.34■□□□□ 0.21
VARS2-209ENST00000477288 NAT8Q9UHE5 227 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 KCNAB3O43448 404 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 ADAP1O75689 374 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 COX6B1P14854 86 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 CRYBB2P43320 205 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 CTF1Q16619 201 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 C10orf113Q5VZT2 155 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 SLC23A3Q6PIS1 610 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 NRTNQ99748 197 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 ZNF253O75346 499 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 TMEM33P57088 247 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 ELOBQ15370 118 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 CLLU1Q5K131 121 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 OR10AC1Q8NH08 325 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 MANBALQ9NQG1 85 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 IL17BQ9UHF5 180 aa16.34■□□□□ 0.21
VARS2-209ENST00000477288 TMEFF2Q9UIK5 374 aaPredicted RBP16.34■□□□□ 0.21
VARS2-209ENST00000477288 RBFOX3A6NFN3 312 aa16.33■□□□□ 0.21
VARS2-209ENST00000477288 GEMIN2O14893 280 aaKnown RBP16.33■□□□□ 0.21
VARS2-209ENST00000477288 KCNMB1Q16558 191 aa16.33■□□□□ 0.21
VARS2-209ENST00000477288 EAF1Q96JC9 268 aaPredicted RBP16.33■□□□□ 0.21
VARS2-209ENST00000477288 TMEM191AQ9H0A3 160 aa16.33■□□□□ 0.21
VARS2-209ENST00000477288 MS4A5Q9H3V2 200 aa16.33■□□□□ 0.21
VARS2-209ENST00000477288 LIPT2A6NK58 231 aa16.33■□□□□ 0.21
VARS2-209ENST00000477288 WNT5AP41221 380 aa16.33■□□□□ 0.21
VARS2-209ENST00000477288 C9orf172C9J069 976 aa16.33■□□□□ 0.2
VARS2-209ENST00000477288 M0R3E3 92 aa16.33■□□□□ 0.2
VARS2-209ENST00000477288 IL24Q13007 206 aa16.33■□□□□ 0.2
VARS2-209ENST00000477288 ZNF770Q6IQ21 691 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms