RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 FLNBO75369 2602 aaKnown RBP2.49□□□□□ -2.01
PTCD3-211ENST00000476215 HELZ2Q9BYK8 2649 aaKnown RBP2.49□□□□□ -2.01
PTCD3-211ENST00000476215 THADAQ6YHU6 1953 aa2.49□□□□□ -2.01
PTCD3-211ENST00000476215 SETXQ7Z333 2677 aaKnown RBP2.48□□□□□ -2.01
PTCD3-211ENST00000476215 TSC2P49815 1807 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 A0A0A6YYD5 115 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 SPAARA0A1B0GVQ0 90 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 CTNSO60931 367 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 SCO1O75880 301 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 IGLV3-27P01718 113 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 TRBV12-3P01733 135 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 CD28P10747 220 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 HLA-EP13747 358 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 NTF3P20783 257 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 CD82P27701 267 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 CLDN18P56856 261 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 DAOAP59103 153 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 TAS2R43P59537 309 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 OR2B8PP59922 312 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 ADIGQ0VDE8 80 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 IL15RAQ13261 267 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 OR1Q1Q15612 314 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 C6orf99Q4VX62 202 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 C9orf64Q5T6V5 341 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 SYPL2Q5VXT5 272 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 STK40Q8N2I9 435 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 NELFBQ8WX92 580 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 TMEM159Q96B96 161 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 PRSS16Q9NQE7 514 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 ZNF257Q9Y2Q1 563 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 URB1O60287 2271 aaKnown RBP2.48□□□□□ -2.01
PTCD3-211ENST00000476215 PTPRDP23468 1912 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 BAHCC1Q9P281 2608 aa2.48□□□□□ -2.01
PTCD3-211ENST00000476215 GOLGA4Q13439 2230 aaKnown RBP2.48□□□□□ -2.01
PTCD3-211ENST00000476215 MGAQ8IWI9 3026 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 SHANK1Q9Y566 2161 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 APC2O95996 2303 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 ACACAQ13085 2346 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 EML5Q05BV3 1969 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 PIEZO2Q9H5I5 2752 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 LOC400499M0QZD8 3231 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 C16orf90A8MZG2 172 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 CENPBD1B2RD01 187 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 C10orf142B7Z368 130 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 M0QYV0 167 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 HSBP1O75506 76 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 IGLV2-8P01709 118 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 MPV17P39210 176 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 PPP1R2P41236 205 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 CSKP41240 450 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 IDH2P48735 452 aaKnown RBP2.47□□□□□ -2.01
PTCD3-211ENST00000476215 RPS24P62847 133 aaKnown RBP2.47□□□□□ -2.01
PTCD3-211ENST00000476215 FLI1Q01543 452 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-211ENST00000476215 MAD2L1BPQ15013 274 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-211ENST00000476215 HNRNPA1L2Q32P51 320 aaKnown RBP2.47□□□□□ -2.01
PTCD3-211ENST00000476215 TMEM236Q5W0B7 351 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 SLC30A8Q8IWU4 369 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 KIF2BQ8N4N8 673 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 WFDC5Q8TCV5 224 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 AGMATQ9BSE5 352 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 C1orf50Q9BV19 199 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 SFXN3Q9BWM7 321 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 NAA50Q9GZZ1 169 aaKnown RBP2.47□□□□□ -2.01
PTCD3-211ENST00000476215 FBXO8Q9NRD0 319 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 RWDD2AQ9UIY3 292 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 OBSL1O75147 1896 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 NUP205Q92621 2012 aa2.47□□□□□ -2.01
PTCD3-211ENST00000476215 PRAMEF26H0Y7S4 382 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 MFNGO00587 321 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 SCELO95171 688 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 FARS2O95363 451 aaKnown RBP2.46□□□□□ -2.02
PTCD3-211ENST00000476215 PTHP01270 115 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 CATP04040 527 aaKnown RBP2.46□□□□□ -2.02
PTCD3-211ENST00000476215 TACSTD2P09758 323 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 TGFBR1P36897 503 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 RPS11P62280 158 aaKnown RBP eCLIP2.46□□□□□ -2.02
PTCD3-211ENST00000476215 ELF3P78545 371 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-211ENST00000476215 NUMA1Q14980 2115 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 CST6Q15828 149 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 HADHQ16836 314 aaKnown RBP2.46□□□□□ -2.02
PTCD3-211ENST00000476215 EXOC3L4Q17RC7 722 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 C5orf64Q2M2E5 130 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 PLCXD3Q63HM9 321 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 C16orf47Q6ZP98 133 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-211ENST00000476215 TAC4Q86UU9 113 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 DEFB106AQ8N104 65 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 TRAM1L1Q8N609 369 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 C1orf64Q8NEQ6 169 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 OR4M2Q8NGB6 313 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 GLYATL2Q8WU03 294 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 RXFP2Q8WXD0 754 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 RDH12Q96NR8 316 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 SERPINB11Q96P15 392 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 LHX5Q9H2C1 402 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 LINC00574Q9H8X3 128 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 REEP1Q9H902 201 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 DYRK4Q9NR20 520 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 TREX1Q9NSU2 369 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 DDIT4Q9NX09 232 aa2.46□□□□□ -2.02
PTCD3-211ENST00000476215 FBXL12Q9NXK8 326 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms