RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 FAM90A16PA6NEW6 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A20PA6NIJ5 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A8PA6NJQ4 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A7PA6NKC0 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A22PA8MWA6 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A12PA8MX19 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A5PA8MXJ8 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A23PA8MXZ1 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 HOXA3O43365 443 aaPredicted RBP11.8□□□□□ -0.52
ABCF3-211ENST00000475728 CLPXO76031 633 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 MELTFP08582 738 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A15PP0C7V4 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A13PP0C7W8 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A14PP0C7W9 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A24PP0C7X0 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 IGHV1-8P0DP01 117 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 SAA4P35542 130 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 GLIPR1P48060 266 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 PSMD7P51665 324 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 AESQ08117 197 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 ATXN7L3Q14CW9 347 aaPredicted RBP11.8□□□□□ -0.52
ABCF3-211ENST00000475728 SLC9A3R2Q15599 337 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 KCTD21Q4G0X4 260 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 C1orf100Q5SVJ3 147 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 UBE2UQ5VVX9 321 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 TMEM91Q6ZNR0 172 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 LRRTM1Q86UE6 522 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 LYPD6Q86Y78 171 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 SPARTQ8N0X7 666 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 TPRX1Q8N7U7 411 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.8□□□□□ -0.52
ABCF3-211ENST00000475728 ZNF565Q8N9K5 539 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 OR4D6Q8NGJ1 314 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 DPCDQ9BVM2 203 aaPredicted RBP11.8□□□□□ -0.52
ABCF3-211ENST00000475728 NDUFB11Q9NX14 153 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 SOX21Q9Y651 276 aaPredicted RBP11.8□□□□□ -0.52
ABCF3-211ENST00000475728 SESN1Q9Y6P5 492 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 MDFIC2A0A1B0GVS7 189 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 A0A1W2PRD5 423 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 A0A1W2PRF3 423 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 A0A1W2PRM7 423 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 ZNF729A6NN14 1252 aaPredicted RBP11.79□□□□□ -0.52
ABCF3-211ENST00000475728 CCRL2O00421 344 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 HSPB6O14558 160 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 GEMIN2O14893 280 aaKnown RBP11.79□□□□□ -0.52
ABCF3-211ENST00000475728 CRTAPO75718 401 aaPredicted RBP11.79□□□□□ -0.52
ABCF3-211ENST00000475728 GALP22466 123 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 COX7A1P24310 79 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 PSMB9P28065 219 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 GP2P55259 537 aaKnown RBP11.79□□□□□ -0.52
ABCF3-211ENST00000475728 FABP5Q01469 135 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 RBM39Q14498 530 aaKnown RBP11.79□□□□□ -0.52
ABCF3-211ENST00000475728 ATAD3CQ5T2N8 411 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 HCP5Q6MZN7 132 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 ZNF782Q6ZMW2 699 aaPredicted RBP11.79□□□□□ -0.52
ABCF3-211ENST00000475728 TCF23Q7RTU1 214 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 PNKDQ8N490 385 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 SUMF2Q8NBJ7 301 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 OR6M1Q8NGM8 313 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 GCDHQ92947 438 aaPredicted RBP11.79□□□□□ -0.52
ABCF3-211ENST00000475728 COQ2Q96H96 371 aa11.79□□□□□ -0.52
ABCF3-211ENST00000475728 MEIKINA0A087WXM9 373 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 TMEM30CPA0ZSE6 113 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 MCRIP1C9JLW8 97 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 WIPF1O43516 503 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 GLAP06280 429 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 CD37P11049 281 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 MGMTP16455 207 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 CALRP27797 417 aaKnown RBP11.78□□□□□ -0.52
ABCF3-211ENST00000475728 HTR2CP28335 458 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 DLX1P56177 255 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 RPL15P61313 204 aaKnown RBP11.78□□□□□ -0.52
ABCF3-211ENST00000475728 PRB3Q04118 309 aaPredicted RBP11.78□□□□□ -0.52
ABCF3-211ENST00000475728 SSX1Q16384 188 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 TAF9Q16594 264 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 C16orf87Q6PH81 154 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 HEPN1Q6WQI6 88 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 OR11H6Q8NGC7 330 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 OR5R1Q8NH85 324 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 KCNG3Q8TAE7 436 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 NEK7Q8TDX7 302 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 C1orf147Q96MC9 270 aaPredicted RBP11.78□□□□□ -0.52
ABCF3-211ENST00000475728 DUX5Q96PT3 197 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 SELENOIQ9C0D9 397 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 PPIL3Q9H2H8 161 aaKnown RBP11.78□□□□□ -0.52
ABCF3-211ENST00000475728 PLGRKTQ9HBL7 147 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 ZNRD1Q9P1U0 126 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 KIF25Q9UIL4 384 aa11.78□□□□□ -0.52
ABCF3-211ENST00000475728 TBL2Q9Y4P3 447 aaKnown RBP11.78□□□□□ -0.52
ABCF3-211ENST00000475728 TRDV1A0A1B0GX56 115 aa11.77□□□□□ -0.53
ABCF3-211ENST00000475728 MEX3AA1L020 520 aaKnown RBP11.77□□□□□ -0.53
ABCF3-211ENST00000475728 PDCD5O14737 125 aa11.77□□□□□ -0.53
ABCF3-211ENST00000475728 SLC22A1O15245 554 aa11.77□□□□□ -0.53
ABCF3-211ENST00000475728 BPNT1O95861 308 aa11.77□□□□□ -0.53
ABCF3-211ENST00000475728 CRYBA1P05813 215 aa11.77□□□□□ -0.53
ABCF3-211ENST00000475728 FUT3P21217 361 aa11.77□□□□□ -0.53
ABCF3-211ENST00000475728 MYL9P24844 172 aa11.77□□□□□ -0.53
ABCF3-211ENST00000475728 GLP1RP43220 463 aa11.77□□□□□ -0.53
ABCF3-211ENST00000475728 IER3P46695 156 aa11.77□□□□□ -0.53
ABCF3-211ENST00000475728 AANATQ16613 207 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms