RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 LYG1Q8N1E2 194 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 TNFAIP8L1Q8WVP5 186 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 NR1H4Q96RI1 486 aaPredicted RBP16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 CITED2Q99967 270 aaPredicted RBP16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 OCSTAMPQ9BR26 566 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 BARHL1Q9BZE3 327 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 ZNF286AQ9HBT8 521 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 FGF20Q9NP95 211 aaPredicted RBP16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 PCDHB16Q9NRJ7 776 aa16.31■□□□□ 0.2
PDLIM4-206ENST00000474421 IRGMA1A4Y4 181 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 FAM172BPA6NC97 362 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 EBAG9O00559 213 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 LIMS3P0CW19 117 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 LIMS4P0CW20 117 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 DCKP27707 260 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 C21orf33P30042 268 aaPredicted RBP16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 GDNFP39905 211 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 RSU1Q15404 277 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 TPTE2P1Q5T6R2 138 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 Q6ZS46 218 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 OR9G1Q8NH87 305 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 CNIH3Q8TBE1 160 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 APH1BQ8WW43 257 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 R3HDM4Q96D70 268 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 SLC25A33Q9BSK2 321 aa16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 PPIL3Q9H2H8 161 aaKnown RBP16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 SMPD3Q9NY59 655 aaPredicted RBP16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 AMMECR1Q9Y4X0 333 aaPredicted RBP16.3■□□□□ 0.2
PDLIM4-206ENST00000474421 MEIKINA0A087WXM9 373 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 M0QZK8 103 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 GABRPO00591 440 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 OR2F2O95006 317 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 NFYBP25208 207 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 GLP1RP43220 463 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 SOX2P48431 317 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 PAX5Q02548 391 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 ZSCAN26Q16670 478 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 C17orf58Q2M2W7 97 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 REC114Q7Z4M0 266 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 Q8NFD4 153 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 OR5AU1Q8NGC0 362 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 RBM14Q96PK6 669 aaKnown RBP16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 FAM192AQ9GZU8 254 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 MMP28Q9H239 520 aa16.29■□□□□ 0.2
PDLIM4-206ENST00000474421 TRAV24A0A0B4J272 114 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 LY6LH3BQJ8 138 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 HSPB6O14558 160 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 BAG2O95816 211 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 CGB3P0DN86 165 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 CGB7P0DN87 165 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 CD24P25063 80 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 OR3A4PP47883 348 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 GTF2A1P52655 376 aaPredicted RBP16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 PPP3R1P63098 170 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 RBM39Q14498 530 aaKnown RBP16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 TMEM95Q3KNT9 176 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 CENPVQ7Z7K6 275 aaPredicted RBP16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 OR51A2Q8NGJ7 313 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 KIRREL1Q96J84 757 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 LINC00574Q9H8X3 128 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 TMEM138Q9NPI0 162 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 TAS2R4Q9NYW5 299 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 CALYQ9NYX4 217 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 KIF25Q9UIL4 384 aa16.28■□□□□ 0.2
PDLIM4-206ENST00000474421 ADARB2-AS1A8MUL3 147 aa16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 WBP4O75554 376 aaKnown RBP16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 FAM106CPP0CH98 169 aa16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 MYL12AP19105 171 aa16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 ASCL4Q6XD76 172 aa16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 RGP1Q92546 391 aaPredicted RBP16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 TMEM106AQ96A25 262 aa16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 RPEQ96AT9 228 aa16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 METTL9Q9H1A3 318 aa16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 PAK1IP1Q9NWT1 392 aaPredicted RBP16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 IDI2-AS1Q9NZ38 188 aa16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 IL36GQ9NZH8 169 aa16.27■□□□□ 0.2
PDLIM4-206ENST00000474421 HTR3BO95264 441 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 IL1AP01583 271 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 ETV1P50549 477 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 CD83Q01151 205 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 MED21Q13503 144 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 SMN1Q16637 294 aaKnown RBP16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 ABCA11PQ4W5N1 156 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 SLC16A12Q6ZSM3 486 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 OR10A7Q8NGE5 316 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 OR13A1Q8NGR1 328 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 TOMM40LQ969M1 308 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 S100A13Q99584 98 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 IFT22Q9H7X7 185 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 BABAM2Q9NXR7 383 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 ZNF281Q9Y2X9 895 aa16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 EXOSC1Q9Y3B2 195 aaKnown RBP16.26■□□□□ 0.19
PDLIM4-206ENST00000474421 J3QR06 171 aa16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 CSTBP04080 98 aaKnown RBP16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 ZNF93P35789 620 aaPredicted RBP16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 PIGYQ3MUY2 71 aa16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 NHLRC3Q5JS37 347 aa16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 RSBN1Q5VWQ0 802 aaPredicted RBP16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 LINC00596Q86U02 117 aa16.25■□□□□ 0.19
PDLIM4-206ENST00000474421 THNSL2Q86YJ6 484 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms