RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 DYRK2Q92630 601 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 ISYNA1Q9NPH2 558 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 TAS2R3Q9NYW6 316 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 DSCAML1Q8TD84 2053 aa11.58□□□□□ -0.56
VAMP4-203ENST00000474047 MEIKINA0A087WXM9 373 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 TRAV24A0A0B4J272 114 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 OMGP23515 440 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 KCNJ3P48549 501 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 MLLT11Q13015 90 aaPredicted RBP11.57□□□□□ -0.56
VAMP4-203ENST00000474047 TPBGQ13641 420 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 GLT8D1Q68CQ7 371 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 UNQ9370/PRO34162Q6UXP9 181 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 TCF23Q7RTU1 214 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 BEND2Q8NDZ0 799 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 OR5R1Q8NH85 324 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 CORO2AQ92828 525 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 FOXRED1Q96CU9 486 aaPredicted RBP11.57□□□□□ -0.56
VAMP4-203ENST00000474047 MGLLQ99685 303 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 SSX3Q99909 188 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 DPCDQ9BVM2 203 aaPredicted RBP11.57□□□□□ -0.56
VAMP4-203ENST00000474047 KIAA2026Q5HYC2 2103 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 STAB1Q9NY15 2570 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 GEMIN2O14893 280 aaKnown RBP11.57□□□□□ -0.56
VAMP4-203ENST00000474047 GPR137BO60478 399 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 CRTAPO75718 401 aaPredicted RBP11.57□□□□□ -0.56
VAMP4-203ENST00000474047 SRMP19623 302 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 CDK2P24941 298 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 PSMA1P25786 263 aaKnown RBP11.57□□□□□ -0.56
VAMP4-203ENST00000474047 GLP1RP43220 463 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 TAF9Q16594 264 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 MPV17LQ2QL34 196 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 NHLRC3Q5JS37 347 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 FAM27D1Q5T7N8 215 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 PRAMEF5Q5TYX0 476 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 GDPGP1Q6ZNW5 385 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 SUMF2Q8NBJ7 301 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 C17orf50Q8WW18 174 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 PHYHIPQ92561 330 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 MRPS24Q96EL2 167 aaKnown RBP11.57□□□□□ -0.56
VAMP4-203ENST00000474047 COQ2Q96H96 371 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 UQCC2Q9BRT2 126 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 CLEC7AQ9BXN2 247 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 PPIL3Q9H2H8 161 aaKnown RBP11.57□□□□□ -0.56
VAMP4-203ENST00000474047 TMEM133Q9H2Q1 129 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 KIF25Q9UIL4 384 aa11.57□□□□□ -0.56
VAMP4-203ENST00000474047 ZNF729A6NN14 1252 aaPredicted RBP11.56□□□□□ -0.56
VAMP4-203ENST00000474047 H3BUX3 64 aa11.56□□□□□ -0.56
VAMP4-203ENST00000474047 DENRO43583 198 aaKnown RBP11.56□□□□□ -0.56
VAMP4-203ENST00000474047 CPEP16870 476 aa11.56□□□□□ -0.56
VAMP4-203ENST00000474047 RPL15P61313 204 aaKnown RBP11.56□□□□□ -0.56
VAMP4-203ENST00000474047 LRRC75BQ2VPJ9 315 aa11.56□□□□□ -0.56
VAMP4-203ENST00000474047 ZNF367Q7RTV3 350 aa11.56□□□□□ -0.56
VAMP4-203ENST00000474047 SVOPQ8N4V2 548 aa11.56□□□□□ -0.56
VAMP4-203ENST00000474047 OR11H6Q8NGC7 330 aa11.56□□□□□ -0.56
VAMP4-203ENST00000474047 OR4F5Q8NH21 305 aa11.56□□□□□ -0.56
VAMP4-203ENST00000474047 NDNFQ8TB73 568 aa11.56□□□□□ -0.56
VAMP4-203ENST00000474047 TAF15Q92804 592 aaKnown RBP eCLIP11.56□□□□□ -0.56
VAMP4-203ENST00000474047 SELENOIQ9C0D9 397 aa11.56□□□□□ -0.56
VAMP4-203ENST00000474047 BANF2Q9H503 90 aa11.56□□□□□ -0.56
VAMP4-203ENST00000474047 VPREB3Q9UKI3 123 aa11.56□□□□□ -0.56
VAMP4-203ENST00000474047 TBL2Q9Y4P3 447 aaKnown RBP11.56□□□□□ -0.56
VAMP4-203ENST00000474047 IGHV2-26A0A0B4J1V2 119 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 A0A1W2PP11 408 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 ARL6IP5O75915 188 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 NFYBP25208 207 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 CFPP27918 469 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 GABARAPL2P60520 117 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 RPS25P62851 125 aaKnown RBP11.55□□□□□ -0.56
VAMP4-203ENST00000474047 TBCEQ15813 527 aaPredicted RBP11.55□□□□□ -0.56
VAMP4-203ENST00000474047 PLA1AQ53H76 456 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 DHRS7BQ6IAN0 325 aaPredicted RBP11.55□□□□□ -0.56
VAMP4-203ENST00000474047 HEPN1Q6WQI6 88 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 LHFPL4Q7Z7J7 247 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 ABHD12Q8N2K0 398 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 CST11Q9H112 138 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 MEGF9Q9H1U4 602 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 IFT22Q9H7X7 185 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 BEX1Q9HBH7 125 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 SPACA1Q9HBV2 294 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 ABCB10Q9NRK6 738 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 GHRLQ9UBU3 117 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 MCRIP1C9JLW8 97 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 TOR1AO14656 332 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 UCHL1P09936 223 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 UBBP0CG47 229 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 MGMTP16455 207 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 RAG2P55895 527 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 RBM39Q14498 530 aaKnown RBP11.55□□□□□ -0.56
VAMP4-203ENST00000474047 FAM189A2Q15884 450 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 SSX2Q16385 188 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 LY6EQ16553 131 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 ZNF626Q68DY1 528 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 BRICD5Q6PL45 260 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 RTN4RL2Q86UN3 420 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 MALSU1Q96EH3 234 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 ACOT13Q9NPJ3 140 aa11.55□□□□□ -0.56
VAMP4-203ENST00000474047 KBTBD11-OT1A0A1B0GTJ5 212 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 A0A1B0GUS0 222 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 TMEM30CPA0ZSE6 113 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 FAM172BPA6NC97 362 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms